CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018696_P001	Maize	extracellular	89.15	84.71
Os07t0119400-01	Rice	extracellular	79.39	80.55
TraesCS2D01G259100.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	78.3	79.6
HORVU2Hr1G062590.3	Barley	extracellular	77.58	79.44
TraesCS2B01G277200.1	Wheat	extracellular	78.3	79.16
TraesCS2A01G264900.1	Wheat	extracellular	77.22	78.49
GSMUA_Achr6P34670_001	Banana	extracellular	64.38	66.92
GSMUA_Achr10P...	Banana	extracellular	64.38	64.96
KRH76937	Soybean	endoplasmic reticulum	61.48	62.96
KRH28523	Soybean	extracellular	60.76	62.57
Solyc02g065170.2.1	Tomato	nucleus	60.76	62.34
PGSC0003DMT400002004	Potato	extracellular	60.58	62.15
KRH57764	Soybean	cytosol, extracellular, plastid	47.74	62.12
Solyc02g090360.2.1	Tomato	extracellular	60.22	61.9
VIT_00s0253g00040.t01	Wine grape	extracellular	59.31	61.19
KRH04707	Soybean	endoplasmic reticulum	59.86	61.18
CDY18626	Canola	extracellular	57.87	59.15
Bra037137.1-P	Field mustard	extracellular	57.69	58.96
CDX81353	Canola	extracellular	57.69	58.96
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	57.69	58.53
CDY01453	Canola	extracellular, golgi	57.5	58.35
CDY68812	Canola	cytosol, peroxisome	46.84	58.07
CDY12788	Canola	extracellular	56.96	58.01
PGSC0003DMT400025973	Potato	extracellular	59.67	58.0
Bra036800.1-P	Field mustard	extracellular	55.88	57.12
CDY43557	Canola	extracellular	55.88	57.12
AT5G66920.1	Thale cress	extracellular, plasma membrane, vacuole	56.06	56.78
EER97278	Sorghum	extracellular, golgi	56.24	56.75
EER90222	Sorghum	extracellular	55.15	55.86
EES12655	Sorghum	extracellular	54.25	51.9
EES01652	Sorghum	extracellular, golgi, vacuole	48.64	48.21
EES19711	Sorghum	extracellular	48.1	47.59
EER92264	Sorghum	extracellular	47.56	44.58
KXG24449	Sorghum	cytosol, nucleus, vacuole	40.69	44.55
EER93966	Sorghum	extracellular	47.74	44.07
EER89036	Sorghum	plasma membrane	46.11	43.22

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	UniProt:A0A1W0W1V5	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0009628	GO:GO:0016491	GO:GO:0030312	GO:GO:0055114	GO:GO:0080167	InterPro:IPR008972
EnsemblPlants:OQU88350	ProteinID:OQU88350	ProteinID:OQU88350.1	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF26	EnsemblPlantsGene:SORBI_3002G016400	SUPFAM:SSF49503	SignalP:SignalP-noTM	UniParc:UPI0009DC8F6B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:1485820..1488539

Molecular Weight (calculated)

59432.0 Da

IEP (calculated)

5.909

GRAVY (calculated)

-0.058

Length

553 amino acids

Sequence
(BLAST)

001: MAAPPPAPFL LLLAVAAASL AGADDPYRYF TWTVTYGPIT PLGTTQQGIL INGQFPGPRI DCVTNDNLVV TVLNALDEPF LLTWNGIKQR KNSWQDGVAG
101: TNCAIPPGAN YTYHFQTKDQ IGTFFYFPSL ALHRAAGGFG ALNVYQRPAI PVPYPPPAGD FTLLVGDWYA AASPHVDLRN ALDAATGGAA LPPPDALLIN
201: GAPSGAATFV GNGGGTYLFR VSNVGLRASV NVRIQGHALR LVEVEGTHPV QNVYDSLDVH AGQSLAFLVT LDQPPLDYAV VASTRFTNNE SELTAVATLH
301: YAGATARAPG PLPPAPAPFD YGWSLNQARS FRWNLTASAA RPNPQGSFHY GAIPTSRTLV LASSSSAPAG GRRQCAVNGV SFVVPDTPLK LADNYNIADV
401: IDWDTLPARP DAAGAGAVAP RAGTPVLRLG LHEFVEVVFQ NTESELQAWH LDGYDFWVVG YGDGQWNETQ RQTYNLVDAQ ARHTVQVYPN GWSAILVSLD
501: NQGMWNLRSA IWDRQYLGQQ LYLRVWTPQQ SFSNEYAIPT DAILCGKAVG LPH

Best Arabidopsis Sequence Match ( AT5G66920.1 )
(BLAST)

001: MKMASRKTTS LLNHLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK
101: NSWQDGVLGT NCPIQPNSNF TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPLPTADF TLLVGDWFKT NHKTLQQRLD SGGVLPFPDG
201: MLINGQTQST FSGDQGKTYM LRISNVGLSS TFNFRIQGHT MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YIVASTRFIR SKLSVMGLLR
301: YSNSRVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG MISPTKTFVF SNSAPLINGK QRYAVNGVSY VKSETPLKLA DHFGISGVFS
401: TNAIQSVPSN SPPTVATSVV QTSHHDFLEI VFQNNEKSMQ SWHLDGYDFW VVGFGSGQWT PAKRSLHNLV DALTRHTTQV YPESWTTILV SLDNQGMWNM
501: RSAIWERQYS GQQFYLKVWN SVQSLANEYN PPDNLQLCGK AVGRHV

Arabidopsis Description

sks17Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.