Factsheet for TraesCS2A01G264900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G277200.1	Wheat	extracellular	97.79	97.26
TraesCS2D01G259100.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	97.06	97.06
HORVU2Hr1G062590.3	Barley	extracellular	95.04	95.74
Os07t0119400-01	Rice	extracellular	85.66	85.5
OQU88350	Sorghum	extracellular	78.49	77.22
Zm00001d018696_P001	Maize	extracellular	77.57	72.51
GSMUA_Achr6P34670_001	Banana	extracellular	67.83	69.36
GSMUA_Achr10P...	Banana	extracellular	68.2	67.7
KRH57764	Soybean	cytosol, extracellular, plastid	50.92	65.18
KRH76937	Soybean	endoplasmic reticulum	63.79	64.26
KRH28523	Soybean	extracellular	63.42	64.25
KRH04707	Soybean	endoplasmic reticulum	63.79	64.14
VIT_00s0253g00040.t01	Wine grape	extracellular	62.87	63.81
Solyc02g090360.2.1	Tomato	extracellular	62.68	63.38
Solyc02g065170.2.1	Tomato	nucleus	62.68	63.27
PGSC0003DMT400002004	Potato	extracellular	62.5	63.08
CDY68812	Canola	cytosol, peroxisome	49.45	60.31
CDY18626	Canola	extracellular	59.74	60.07
Bra037137.1-P	Field mustard	extracellular	59.56	59.89
CDX81353	Canola	extracellular	59.38	59.7
PGSC0003DMT400025973	Potato	extracellular	62.13	59.4
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	59.01	58.9
AT5G66920.1	Thale cress	extracellular, plasma membrane, vacuole	59.01	58.79
Bra036800.1-P	Field mustard	extracellular	58.46	58.78
CDY43557	Canola	extracellular	58.46	58.78
CDY01453	Canola	extracellular, golgi	58.64	58.53
CDY12788	Canola	extracellular	58.09	58.2
TraesCS7A01G459400.1	Wheat	extracellular	57.35	57.35
TraesCS2A01G224600.1	Wheat	extracellular	56.62	56.51
TraesCS3A01G170900.1	Wheat	extracellular	47.98	47.98
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	48.35	47.47
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	48.16	46.87
TraesCS2A01G406200.3	Wheat	plasma membrane	50.92	45.79
TraesCS1A01G176000.1	Wheat	plasma membrane	49.08	44.8
TraesCS3A01G085900.1	Wheat	extracellular	48.71	44.69
TraesCS7A01G302400.1	Wheat	extracellular	47.43	43.22
TraesCS7A01G008900.1	Wheat	golgi	45.59	41.68
TraesCS4A01G486100.1	Wheat	golgi	45.77	41.64

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009628
GO:GO:0016491	GO:GO:0030312	GO:GO:0055114	GO:GO:0080167	InterPro:IPR008972	PFAM:PF00394
PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF26	SUPFAM:SSF49503	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS2A01G264900	EnsemblPlants:TraesCS2A01G264900.1	TIGR:cd13846	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:+:420409907..420412236

Molecular Weight (calculated)

59933.8 Da

IEP (calculated)

5.769

GRAVY (calculated)

-0.201

Length

544 amino acids

Sequence
(BLAST)

001: MPRMASLALA RWVLLAAMAA RLAGADDPYR YFTWIVTYGP INPLGAIQQG ILINGQFPGP RIDCVTNDNL IVNVVNNLDE PFLITWNGIK QRKNSWQDGV
101: AGTNCPIPPG ANYTYKFQAK DQIGTFTYFP SVALHRAAGG FGALNVYQRP AIPVPYPPPA GDFTLLVGDW YLAGHDQLRQ TLDSGAPLPF PDALLINGMP
201: SATLVGDQGR TYLLRVSNVG MKTSINFRVQ GHSLKLAEVE GTHPVQNVYD SLDVHVGQSV AFLVTLDQPP MDYAMVASTR FNPADISPLT AVGTLHYSSA
301: TSMAPDPLPA GPPEQESEWS MNQARSFRWN LTASAARPNP QGSFHYGTIQ TSRTLVLASS AAVVAGQRRY AVNGVSFVVP DTPLKLLDNY NIANVIEWDS
401: VPERPDGGAP RPGTPVVRLN LHEFVEVVFQ NTENEMQSWH LDGYDFWVVG YGDNGQWTEN ERLNYNLVDA QARHTVQVYP NGWSAILVSL DNQGMWNLRS
501: ANWDRQYLGQ QLYLRVWTAE QSFSNEYSIP TNAILCGRAA GLPH

Best Arabidopsis Sequence Match ( AT5G66920.1 )
(BLAST)

001: MKMASRKTTS LLNHLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK
101: NSWQDGVLGT NCPIQPNSNF TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPLPTADF TLLVGDWFKT NHKTLQQRLD SGGVLPFPDG
201: MLINGQTQST FSGDQGKTYM LRISNVGLSS TFNFRIQGHT MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YIVASTRFIR SKLSVMGLLR
301: YSNSRVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG MISPTKTFVF SNSAPLINGK QRYAVNGVSY VKSETPLKLA DHFGISGVFS
401: TNAIQSVPSN SPPTVATSVV QTSHHDFLEI VFQNNEKSMQ SWHLDGYDFW VVGFGSGQWT PAKRSLHNLV DALTRHTTQV YPESWTTILV SLDNQGMWNM
501: RSAIWERQYS GQQFYLKVWN SVQSLANEYN PPDNLQLCGK AVGRHV

Arabidopsis Description

sks17Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.