Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G162800.1 | Wheat | extracellular, golgi | 97.15 | 96.5 |
| TraesCS1B01G204100.1 | Wheat | extracellular, plasma membrane | 95.64 | 95.8 |
| HORVU1Hr1G046690.8 | Barley | extracellular, plasma membrane | 89.77 | 87.28 |
| EER93966 | Sorghum | extracellular | 85.4 | 84.97 |
| Os10t0508000-00 | Rice | extracellular | 47.82 | 84.82 |
| Zm00001d032504_P001 | Maize | plasma membrane | 84.4 | 83.0 |
| GSMUA_Achr5P19890_001 | Banana | plasma membrane | 73.32 | 73.45 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 73.32 | 73.2 |
| TraesCS7A01G008900.1 | Wheat | golgi | 68.79 | 68.91 |
| TraesCS4A01G486100.1 | Wheat | golgi | 68.62 | 68.39 |
| TraesCS3A01G085900.1 | Wheat | extracellular | 62.92 | 63.24 |
| TraesCS7A01G302400.1 | Wheat | extracellular | 60.74 | 60.64 |
| TraesCS2A01G224600.1 | Wheat | extracellular | 46.48 | 50.83 |
| TraesCS7A01G459400.1 | Wheat | extracellular | 46.31 | 50.74 |
| TraesCS2A01G264900.1 | Wheat | extracellular | 44.8 | 49.08 |
| TraesCS3A01G170900.1 | Wheat | extracellular | 44.8 | 49.08 |
| TraesCS3A01G340200.1 | Wheat | extracellular, golgi, vacuole | 43.29 | 46.57 |
| TraesCS1A01G304100.1 | Wheat | extracellular, golgi, plasma membrane | 42.11 | 44.9 |
| TraesCS2A01G406200.3 | Wheat | plasma membrane | 42.11 | 41.49 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 | InterPro:Cu-oxidase_3 | InterPro:CuRO_1_AAO-like |
| InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR008972 | PFAM:PF00394 | PFAM:PF07731 |
| PFAM:PF07732 | PANTHER:PTHR11709 | PANTHER:PTHR11709:SF58 | SUPFAM:SSF49503 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS1A01G176000 |
| EnsemblPlants:TraesCS1A01G176000.1 | TIGR:cd13846 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1A:+:314428432..314432118
Molecular Weight (calculated)
65523.5 Da
IEP (calculated)
7.116
GRAVY (calculated)
-0.189
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLLALVVF AAVPAMAGDP YAFFDWDVSY VTAAPLGVKQ QVIGINGKFP GPVVNITTNW NVVVNVLNDL DEPLLITWNG IQHRKNCWQD GVLGTNCPIP
101: SGWNWTYEFQ VKDQIGSFFY FPSTGLQRAA GGFGGIVVNN RGVIAVPFGR PDGDITILIG DWYNRNHTDL RKMLDEGKEL GMPDGVLING KGPYRYNDSL
201: VPAGIEHETI DVHPGRTYRI RVHNVGTSTS LNFRIQGHNL LLVETEGSYT TQQNYSSLDV HVGQSYSFLL TTDQNASSDY YVVASARIVN ESLWQRVTGV
301: ALLRYSNSGG PASGPLPDPP QDQYDKTLSM NQARSVRWNL SAGAARPNPQ GSFRYSSINV TQAYLLRSAA PVEIGGKLRA ALNGLSFVPP ETPLRLADAY
401: GVEGAYTLDF PERPPAPDAA PRVARSVING TYRGFMELIF QNNDTRMQSY HVDGYAVFVV GMDYGEWTEA SRSTYNKGDS VARSTVQVYP GAWTAALVSL
501: DNVGFWNVRS QNLDSWYLGQ EVYVRVVNPE DGANKTEMAV PRNALYCGQL HKYQKEQTPH HKAAAAASAA AVRPLAVRRQ IVALVMLVVG ALVFAS
101: SGWNWTYEFQ VKDQIGSFFY FPSTGLQRAA GGFGGIVVNN RGVIAVPFGR PDGDITILIG DWYNRNHTDL RKMLDEGKEL GMPDGVLING KGPYRYNDSL
201: VPAGIEHETI DVHPGRTYRI RVHNVGTSTS LNFRIQGHNL LLVETEGSYT TQQNYSSLDV HVGQSYSFLL TTDQNASSDY YVVASARIVN ESLWQRVTGV
301: ALLRYSNSGG PASGPLPDPP QDQYDKTLSM NQARSVRWNL SAGAARPNPQ GSFRYSSINV TQAYLLRSAA PVEIGGKLRA ALNGLSFVPP ETPLRLADAY
401: GVEGAYTLDF PERPPAPDAA PRVARSVING TYRGFMELIF QNNDTRMQSY HVDGYAVFVV GMDYGEWTEA SRSTYNKGDS VARSTVQVYP GAWTAALVSL
501: DNVGFWNVRS QNLDSWYLGQ EVYVRVVNPE DGANKTEMAV PRNALYCGQL HKYQKEQTPH HKAAAAASAA AVRPLAVRRQ IVALVMLVVG ALVFAS
001: MAATDFFFAF VFSFALIFGF SFAGDPYVSY DFTLSYITAS PLGVPQQVIA VNGKFPGPVI NATTNYNVHV NVLNHLDEPL LLTWPGVQMR RNSWQDGVLG
101: TNCPIPPNWN FTYDFQLKDQ IGSYFYSPSL NFQRASGGFG ALIINNRDLV PIPFTEPDGE IIFIIGDWYT QNHTALRRIL DSGKELGMPD GVLINGKGPF
201: KYNSSVPDGI EHETVNVDPG KTYRIRVHNV GISTSLNFRI QNHKLLLIET EGRYTSQMNF TDFDVHVGQS YSFLVTMDQN ATSDYYIVAS ARFVNETVWQ
301: RVTGVGILHY SNSKGPASGP LPVSATDVNH PWSAMNQPRA IKQNTSASGA RPNPQGSFHY GQINITRTYI LRSLPPTKIN GKLRATLNGI SFVNPSTPMR
401: LADDHKVKGD YMLDFPDRPL DEKLPRLSSS IINATYKGFI QVIFQNNDTK IQSFHIDGYA FYVVAMDFGI WSEDRNSSYN NWDAVARSTV EVYPGAWTAV
501: LISLDNVGVW NIRVENLDRW YLGQETYMRI INPEENGSTE MDPPENVMYC GALQAMQKEQ HHSSATKSMT NGQLILIFSM MMVLLSSFSS FC
101: TNCPIPPNWN FTYDFQLKDQ IGSYFYSPSL NFQRASGGFG ALIINNRDLV PIPFTEPDGE IIFIIGDWYT QNHTALRRIL DSGKELGMPD GVLINGKGPF
201: KYNSSVPDGI EHETVNVDPG KTYRIRVHNV GISTSLNFRI QNHKLLLIET EGRYTSQMNF TDFDVHVGQS YSFLVTMDQN ATSDYYIVAS ARFVNETVWQ
301: RVTGVGILHY SNSKGPASGP LPVSATDVNH PWSAMNQPRA IKQNTSASGA RPNPQGSFHY GQINITRTYI LRSLPPTKIN GKLRATLNGI SFVNPSTPMR
401: LADDHKVKGD YMLDFPDRPL DEKLPRLSSS IINATYKGFI QVIFQNNDTK IQSFHIDGYA FYVVAMDFGI WSEDRNSSYN NWDAVARSTV EVYPGAWTAV
501: LISLDNVGVW NIRVENLDRW YLGQETYMRI INPEENGSTE MDPPENVMYC GALQAMQKEQ HHSSATKSMT NGQLILIFSM MMVLLSSFSS FC
Arabidopsis Description
SKS2Monocopper oxidase-like protein SKS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN6]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.