Factsheet for TraesCS3A01G085900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G101500.1	Wheat	extracellular	96.12	95.64
TraesCS3D01G086400.1	Wheat	extracellular	95.78	95.14
HORVU3Hr1G015510.2	Barley	cytosol	54.13	89.92
TraesCS3B01G101200.1	Wheat	extracellular	95.95	89.19
EER92264	Sorghum	extracellular	81.62	82.03
Os01t0100400-01	Rice	extracellular, plasma membrane, vacuole	80.61	80.61
VIT_07s0141g00540.t01	Wine grape	extracellular	70.66	70.42
PGSC0003DMT400074313	Potato	extracellular	68.97	70.15
Zm00001d029193_P001	Maize	mitochondrion	81.62	70.04
GSMUA_Achr3P17240_001	Banana	cytosol	69.81	69.93
Solyc09g055930.2.1	Tomato	extracellular	68.3	69.35
CDY48757	Canola	extracellular, plasma membrane, vacuole	66.1	65.88
CDY05676	Canola	extracellular, plasma membrane, vacuole	66.1	65.77
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	65.77	65.55
KRH46577	Soybean	mitochondrion	70.32	65.46
TraesCS1A01G176000.1	Wheat	plasma membrane	63.24	62.92
TraesCS7A01G008900.1	Wheat	golgi	63.07	62.86
TraesCS4A01G486100.1	Wheat	golgi	62.73	62.21
AT5G48450.1	Thale cress	extracellular	64.42	61.51
TraesCS7A01G302400.1	Wheat	extracellular	61.21	60.8
TraesCS3A01G170900.1	Wheat	extracellular	45.36	49.45
TraesCS2A01G224600.1	Wheat	extracellular	45.36	49.36
TraesCS7A01G459400.1	Wheat	extracellular	44.86	48.9
TraesCS2A01G264900.1	Wheat	extracellular	44.69	48.71
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	43.17	46.21
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	41.32	43.83
TraesCS2A01G406200.3	Wheat	plasma membrane	39.97	39.17

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0016020	GO:GO:0016491
GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF58	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3A01G085900	EnsemblPlants:TraesCS3A01G085900.1	SEG:seg

Description

No Description!

Coordinates

chr3A:-:55502608..55505325

Molecular Weight (calculated)

65602.6 Da

IEP (calculated)

6.322

GRAVY (calculated)

-0.160

Length

593 amino acids

Sequence
(BLAST)

001: MALLLLSLLL LCARSPEPAM AGDPFAYFDW EASYQSARPL GVAQKVIAIN GQFPGPPLNV TTNWNVVVNV RNALDEPLLL TWHGIQHRKT PWQDGVAGTN
101: CPIPAGWNWT YRFQVKDQVG SFFYSPSAAP LHRAAGGYGG IVVNNRDVIP IPFPFPDGDL TLFIGDWYVK SHKDLRRSLD AGAPLGPPDG VLINGLGPYR
201: YNDTLVPPAI SYERINVEPG RTYRLRVHNV GVSTSLNFRI QGHSLLLVET EGSYTSQQNY SNMDIHVGQS YSFLVTMDQN ASTDYYVVAS ARFVADPDKL
301: TGVAILHYSN SQGPASGPLP AAPDDQYDTA FSINQARSIR WNVTASGARP NPQGSFHYGD ITVTDVYLLQ SRPPELIDGQ LRSTINGISY IAPSTPLILA
401: QLFNVPGVFK LDFPNHPMNR LPKVDTSVIN GTYKGFMEII FQNNATTVQS YHLDGYAFFV VGMDYGLWTD NSRGTYNKWD GVARSTIQVF PGAWTAVLVF
501: LDNAGIWNLR VENLDSWYMG QELYISVVNP EEDHSDKTPL PLPDNTIFCG ALSSLQKEQS HRFQYSGASR VGKTVSAAMI STTWLAATWL LYR

Best Arabidopsis Sequence Match ( AT5G48450.1 )
(BLAST)

001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VNINRLCNTK KILDSTAKAQ
601: TDLSLVETDR ISEKNRDRIS Y

Arabidopsis Description

sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.