Factsheet for TraesCS3A01G170900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G195700.1	Wheat	extracellular	78.68	94.69
HORVU3Hr1G033220.2	Barley	extracellular	94.3	91.94
TraesCS3D01G171100.1	Wheat	mitochondrion	94.12	91.27
GSMUA_Achr4P29540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	55.15	53.96
PGSC0003DMT400025541	Potato	extracellular	41.54	51.36
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	45.96	50.71
Solyc04g081520.1.1	Tomato	extracellular	50.0	50.28
TraesCS2A01G224600.1	Wheat	extracellular	50.18	50.09
CDY13534	Canola	extracellular	49.63	49.54
CDY39058	Canola	extracellular	49.45	49.36
AT1G75790.1	Thale cress	extracellular	48.9	48.81
TraesCS2A01G264900.1	Wheat	extracellular	47.98	47.98
TraesCS7A01G459400.1	Wheat	extracellular	47.98	47.98
TraesCS7A01G302400.1	Wheat	extracellular	50.18	45.73
TraesCS3A01G085900.1	Wheat	extracellular	49.45	45.36
TraesCS1A01G176000.1	Wheat	plasma membrane	49.08	44.8
TraesCS4A01G486100.1	Wheat	golgi	48.35	43.98
TraesCS7A01G008900.1	Wheat	golgi	47.61	43.53
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	44.3	43.11
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	43.75	42.96
TraesCS2A01G406200.3	Wheat	plasma membrane	46.32	41.65

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF115	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3A01G170900	EnsemblPlants:TraesCS3A01G170900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:180743730..180745718

Molecular Weight (calculated)

60481.1 Da

IEP (calculated)

8.394

GRAVY (calculated)

-0.239

Length

544 amino acids

Sequence
(BLAST)

001: MDRGRLVAVL LASILHSAVV AAEDRHVFLN WEVSYSVRSP LGVSKRVIAI NGRLPGPLLN LTTNDVAHVN VVNTLDEPFL LTWNGLHMRR NSWNDGVAGT
101: NCAIQPGANW TYVFQAKDEI GSFFYRPSLG LHAAAGGHGP IRVNNRPVID VPFPHPDGEF DVLIGDWYNM DAKEMKERLD RGRELPPPNG ILVNGLGPYE
201: AEVTFKVGRT YRLRVSNVGA RTSLNFRLQG HKLLLVEVEG TYTLQKHYAS LDVHPGQSVS VLVAADQAPK AYYMVVRSLF VLPEIFSVAT VLYAGSGEQP
301: PSGDAPLDER SSHNNYNRSM EQAMSIRMNL TSGAARPNPQ GSFHYGDINV TRTLLLRNDE SDIGGRRRCT VNGVAFANAG TPLKLADYFR IAGVFKVVSG
401: RPETRNPSLG TTVIDASYRD YVQIVFENRL PSMQTWHLDG HSFFVVGMAW GKWSPDARST YNLVDAMYRS TVQVYPTSWT AVLVYLDNEG MWNLRSQDVK
501: RYLGQELYLR VRQGDSEVPD PRDELPMPSN ALLCGKATRL SFGL

Best Arabidopsis Sequence Match ( AT1G75790.1 )
(BLAST)

001: MRHVFVEVLV LISLVILELS YAFAPISSYQ WVVSYSQRFI LGGNKQVIVI NDMFPGPILN ATANDIIVVN IFNNLPEPFL MTWNGLQLRK NSWQDGVRGT
101: NCPILPGTNW TYRFQVKDQI GSYFYFPTLL LQKAAGGYGA IRIYPPELVP VPFPKPDEEY DILIGDWFYL DHTVMRASLD AGHSLPNPDG ILFNGRGPEE
201: TFFAFEPGKT YRLRISNVGL KTCLNFRIQD HDMLLVETEG TYVQKRVYSS LDIHVGQSYS ILVTAKTDPV GIYRSYYIFA TARFTDSYLG GIALIRYPGS
301: PLDPVGQGPL APALQDFGSS VEQALSIRMD LNVGAARSNP QGSYHYGRIN VTRTIILHND VMLSSGKLRY TINGVSFVYP ETPLKLVDHF QLNDTIIPGM
401: FPVYPSNKTP TLGTSVVDIH YKDFIHIVFQ NPLFGLESYH IDGYNFFVVG YGFGAWSESK KAGYNLVDAV SRSTVQVYPY SWTAILIAMD NQGMWNVRSQ
501: KAEQWYLGQE LYMRVKGEGE EDPSTIPVRD ENPIPGNVIR CGKVR

Arabidopsis Description

sks18Multi-copper oxidase type I family protein [Source:UniProtKB/TrEMBL;Acc:Q1PFD0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.