Factsheet for Bra008223.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 1
plasma membrane 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39058	Canola	extracellular	100.0	90.46
CDY13534	Canola	extracellular	99.8	90.28
AT1G75790.1	Thale cress	extracellular	79.11	71.56
PGSC0003DMT400025541	Potato	extracellular	54.77	61.36
Solyc04g081520.1.1	Tomato	extracellular	61.87	56.38
GSMUA_Achr4P29540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	55.98	49.64
HORVU3Hr1G033220.2	Barley	extracellular	52.33	46.24
TraesCS3A01G170900.1	Wheat	extracellular	50.71	45.96
TraesCS3D01G171100.1	Wheat	mitochondrion	51.93	45.63
TraesCS3B01G195700.1	Wheat	extracellular	41.38	45.13
Bra025818.1-P	Field mustard	extracellular	50.1	44.83
Bra013582.1-P	Field mustard	extracellular	49.09	44.73
Bra008241.1-P	Field mustard	extracellular	49.29	44.34
Bra015781.1-P	Field mustard	extracellular	48.07	43.81
Bra034943.1-P	Field mustard	extracellular	48.07	43.73
Bra037137.1-P	Field mustard	extracellular	47.46	43.25
Bra039389.1-P	Field mustard	plasma membrane	45.23	42.88
Bra001503.1-P	Field mustard	extracellular, plasma membrane	47.87	42.52
Bra002824.1-P	Field mustard	cytosol	9.13	42.45
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	46.86	42.39
Bra036800.1-P	Field mustard	extracellular	46.45	42.33
Bra022513.1-P	Field mustard	extracellular	47.06	42.26
Bra001504.1-P	Field mustard	extracellular	47.06	42.11
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	46.86	41.85
Bra038001.1-P	Field mustard	extracellular, vacuole	47.06	41.8
Bra030850.1-P	Field mustard	plasma membrane	46.45	41.71
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	46.65	41.52
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	46.45	41.34
Bra032154.1-P	Field mustard	extracellular	44.42	40.63
Bra017796.1-P	Field mustard	extracellular	44.42	40.56
Bra034680.1-P	Field mustard	extracellular, plasma membrane	44.02	39.24
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	47.26	39.16
Bra029171.1-P	Field mustard	extracellular	46.25	38.97
Bra013877.1-P	Field mustard	plasma membrane	47.06	38.86
Bra022551.1-P	Field mustard	plasma membrane	45.84	37.86
Bra018479.1-P	Field mustard	plasma membrane	44.83	37.71
Bra030849.1-P	Field mustard	cytosol	12.58	37.58
Bra000773.1-P	Field mustard	extracellular	44.42	37.44
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	47.87	36.93
Bra034914.1-P	Field mustard	extracellular	5.48	34.62
Bra011721.1-P	Field mustard	mitochondrion, plastid	44.83	18.63

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra008223	EnsemblPlants:Bra008223.1	EnsemblPlants:Bra008223.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972
UniProt:M4CVH6	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF115
SUPFAM:SSF49503	UniParc:UPI0002545D39	SEG:seg	:	:	:

Description

AT1G75790 (E=4e-235) sks18 | sks18 (SKU5 Similar 18); copper ion binding / pectinesterase

Coordinates

chrA02:-:13912630..13915292

Molecular Weight (calculated)

55848.2 Da

IEP (calculated)

7.721

GRAVY (calculated)

-0.306

Length

493 amino acids

Sequence
(BLAST)

001: MFPGPILKAT AGDVVNVNIF NHLTEPFLMT WNGLQMRKNS WQDGVRGTNC PILPGTNWTY RFQIKDQIGS YFYFPTLLFQ KAAGGYGSIR VYSPELVPVP
101: FPRPDGEFDI LIGDWFYTDY RGMRASLDNG LSLATPDGIL FNGHGPEEAF FAFQPGKTYR LRISNVGLKT SLNFRIQDHD MLLVETEGSY VQKRTLSNLD
201: IHVGQSYSVL VTAKTDPIGS HRSYYIFAST RFSNSYMTGL ALIRYPNSPV DPVGPVPAAP ESWDYASSVR QTLSIREDLA VGAARPNPQG SYHYGRVNVS
301: RTIILQNDVM SSSNRLRYTV NGVSFVFPET PLKLADHFQL KNTIVPNMFP TYPSNKTPRF GTSVVDIRYR DFVHIVFENP LDESQSWHID GYNFWVVGMG
401: FGGWSESKRA GYNLVDAVSR STIQVFPYSW VAILIAMDNQ GMWNVRSQKA EQWYLGEELY FRVKGDGQED PRNIPTRDES PIPENFLRCG RVL

Best Arabidopsis Sequence Match ( AT1G75790.1 )
(BLAST)

001: MRHVFVEVLV LISLVILELS YAFAPISSYQ WVVSYSQRFI LGGNKQVIVI NDMFPGPILN ATANDIIVVN IFNNLPEPFL MTWNGLQLRK NSWQDGVRGT
101: NCPILPGTNW TYRFQVKDQI GSYFYFPTLL LQKAAGGYGA IRIYPPELVP VPFPKPDEEY DILIGDWFYL DHTVMRASLD AGHSLPNPDG ILFNGRGPEE
201: TFFAFEPGKT YRLRISNVGL KTCLNFRIQD HDMLLVETEG TYVQKRVYSS LDIHVGQSYS ILVTAKTDPV GIYRSYYIFA TARFTDSYLG GIALIRYPGS
301: PLDPVGQGPL APALQDFGSS VEQALSIRMD LNVGAARSNP QGSYHYGRIN VTRTIILHND VMLSSGKLRY TINGVSFVYP ETPLKLVDHF QLNDTIIPGM
401: FPVYPSNKTP TLGTSVVDIH YKDFIHIVFQ NPLFGLESYH IDGYNFFVVG YGFGAWSESK KAGYNLVDAV SRSTVQVYPY SWTAILIAMD NQGMWNVRSQ
501: KAEQWYLGQE LYMRVKGEGE EDPSTIPVRD ENPIPGNVIR CGKVR

Arabidopsis Description

sks18Multi-copper oxidase type I family protein [Source:UniProtKB/TrEMBL;Acc:Q1PFD0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.