Factsheet for TraesCS3B01G195700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G170900.1	Wheat	extracellular	94.69	78.68
TraesCS3D01G171100.1	Wheat	mitochondrion	96.68	77.9
HORVU3Hr1G033220.2	Barley	extracellular	95.35	77.24
GSMUA_Achr4P29540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	55.09	44.78
TraesCS2B01G274800.1	Wheat	vacuole	50.0	41.47
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	45.13	41.38
Solyc04g081520.1.1	Tomato	extracellular	49.34	41.22
CDY13534	Canola	extracellular	49.34	40.92
TraesCS2B01G423900.1	Wheat	extracellular	50.22	40.75
CDY39058	Canola	extracellular	49.12	40.73
TraesCS7B01G359700.1	Wheat	extracellular	48.67	40.59
TraesCS7B01G202500.1	Wheat	extracellular	52.88	40.03
AT1G75790.1	Thale cress	extracellular	48.23	40.0
PGSC0003DMT400025541	Potato	extracellular	38.72	39.77
TraesCS2B01G277200.1	Wheat	extracellular	47.79	39.49
TraesCS1B01G204100.1	Wheat	extracellular, plasma membrane	50.66	38.49
TraesCS3B01G101500.1	Wheat	extracellular	50.22	38.09
TraesCS1B01G314600.1	Wheat	plasma membrane	44.69	36.14
TraesCS3B01G101200.1	Wheat	extracellular	50.88	36.05
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	43.36	35.25

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF115	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3B01G195700	EnsemblPlants:TraesCS3B01G195700.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:222206409..222208680

Molecular Weight (calculated)

49851.4 Da

IEP (calculated)

7.808

GRAVY (calculated)

-0.188

Length

452 amino acids

Sequence
(BLAST)

001: MDRGRLVAVV LAGILHSALV AAEDRHVFLN WEVSYSVRSP LGVSKRVIAI NGRLPGPLLN FTTNDVAHVN VVNTLDEPFL LTWNGLQLRR NSWNDGVAGT
101: NCAIQPGENW TYVFQAKDEI GSFFYRPSLG LHAAAGGHGP IRVNNRPVID VPFPQPDGEF DVLIGDWYNM DAKEMKERLD RGRGLPPPDG ILINGLGPYE
201: AEVTFKAGRT YRLRVSNVGT RTSLNFRLQG HKLLLVEAEG TYTLQKHYAS LDVHPGQSVS VLVAADQAPK AYYMVVSSLF VLPEIFGVAT VLYAGSGEQP
301: PSGDAPLDDR SSHTNYNRSM EQAMSIRMNL TSGAARPNPQ GSFHYGEINV TRTLLLRNDE SDIGGRRRCT VNGVAFANAG TPLKLADYFR IAGVFKVVSG
401: RPERRNASLG TTVIDASYRD YVQIVFENRL PSMQTWHLDG HSFFVVGFEM TM

Best Arabidopsis Sequence Match ( AT1G21850.1 )
(BLAST)

001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F

Arabidopsis Description

sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.