Factsheet for PGSC0003DMT400025541

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
vacuole 1
mitochondrion 2
extracellular 2
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g081520.1.1	Tomato	extracellular	94.32	76.71
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	61.36	54.77
CDY13534	Canola	extracellular	61.36	49.54
CDY39058	Canola	extracellular	61.36	49.54
AT1G75790.1	Thale cress	extracellular	60.91	49.17
GSMUA_Achr4P29540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	58.64	46.4
TraesCS3A01G170900.1	Wheat	extracellular	51.36	41.54
HORVU3Hr1G033220.2	Barley	extracellular	52.27	41.22
PGSC0003DMT400048000	Potato	extracellular	48.64	41.0
TraesCS3D01G171100.1	Wheat	mitochondrion	52.05	40.82
TraesCS3B01G195700.1	Wheat	extracellular	39.77	38.72
PGSC0003DMT400025805	Potato	extracellular	47.05	38.33
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	41.82	38.33
PGSC0003DMT400074510	Potato	extracellular	46.14	37.52
PGSC0003DMT400075398	Potato	extracellular	46.36	37.5
PGSC0003DMT400042483	Potato	extracellular	46.14	37.11
PGSC0003DMT400075620	Potato	extracellular	45.68	37.02
PGSC0003DMT400002004	Potato	extracellular	44.55	36.36
PGSC0003DMT400074313	Potato	extracellular	46.36	34.99
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	42.73	33.75
PGSC0003DMT400025973	Potato	extracellular	43.64	33.74
PGSC0003DMT400016672	Potato	endoplasmic reticulum	42.05	33.39
PGSC0003DMT400060352	Potato	extracellular	41.59	33.15
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	42.27	32.8
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	41.36	32.73
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	40.68	32.08
PGSC0003DMT400035984	Potato	plasma membrane	43.18	32.04
PGSC0003DMT400012216	Potato	extracellular, plasma membrane, vacuole	42.95	31.61

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	UniProt:M1ALK8	PFAM:PF00394	PFAM:PF07731
PFAM:PF07732	EnsemblPlantsGene:PGSC0003DMG400009868	PGSC:PGSC0003DMG400009868	EnsemblPlants:PGSC0003DMT400025541	PANTHER:PTHR11709	PANTHER:PTHR11709:SF115
SUPFAM:SSF49503	UniParc:UPI000294ACD2	:	:	:	:

Description

Multi-copper oxidase type I family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009868]

Coordinates

chr4:+:70878884..70881041

Molecular Weight (calculated)

50130.6 Da

IEP (calculated)

6.063

GRAVY (calculated)

-0.310

Length

440 amino acids

Sequence
(BLAST)

001: MPGKKWTYKF QMKDQIGSFF YFPSLFFQKA AGGYGPIRIN NVETVPLPFA RPDYEYDILI GDWYFDEYKD LRISLEDGCK MPFPDAILIN GMRSNQAIFE
101: FQPGATYRLR ISNVGLKTTL NFKIQDHEML LVETEGAYTL KKYHQNLDIH VGQSYSVLVT AKNHSYGSSY HMLASSRFIP RELSGLASIR YPGFDVEPLV
201: AVYPDEPSQD KYGYSMEQAL SIRTDLLVGA ARRNPQGSYV YGSINISRTL ILQNGEAALD GQNRYTVNGV SFLHPRTPLK LADYFQLSDV FEPGFVPAAP
301: VDDVPRLGVS VIDANYHDFV HVVFQNPLDS LQTWHSDGYN FFVVGMGRGK WEEGKMETYN MIDAIYRSTI QVYPYSWTAI LIKLDNQGMW NLRSQDAEKW
401: YLGQELYIRV KGDVNDPFKI SPRDEAPIPA NVIKCGKVAD

Best Arabidopsis Sequence Match ( AT1G75790.1 )
(BLAST)

001: MRHVFVEVLV LISLVILELS YAFAPISSYQ WVVSYSQRFI LGGNKQVIVI NDMFPGPILN ATANDIIVVN IFNNLPEPFL MTWNGLQLRK NSWQDGVRGT
101: NCPILPGTNW TYRFQVKDQI GSYFYFPTLL LQKAAGGYGA IRIYPPELVP VPFPKPDEEY DILIGDWFYL DHTVMRASLD AGHSLPNPDG ILFNGRGPEE
201: TFFAFEPGKT YRLRISNVGL KTCLNFRIQD HDMLLVETEG TYVQKRVYSS LDIHVGQSYS ILVTAKTDPV GIYRSYYIFA TARFTDSYLG GIALIRYPGS
301: PLDPVGQGPL APALQDFGSS VEQALSIRMD LNVGAARSNP QGSYHYGRIN VTRTIILHND VMLSSGKLRY TINGVSFVYP ETPLKLVDHF QLNDTIIPGM
401: FPVYPSNKTP TLGTSVVDIH YKDFIHIVFQ NPLFGLESYH IDGYNFFVVG YGFGAWSESK KAGYNLVDAV SRSTVQVYPY SWTAILIAMD NQGMWNVRSQ
501: KAEQWYLGQE LYMRVKGEGE EDPSTIPVRD ENPIPGNVIR CGKVR

Arabidopsis Description

sks18Multi-copper oxidase type I family protein [Source:UniProtKB/TrEMBL;Acc:Q1PFD0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.