Factsheet for PGSC0003DMT400074506

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 3
golgi 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g052230.2.1	Tomato	extracellular	95.62	85.47
VIT_12s0059g00770.t01	Wine grape	extracellular	82.29	73.01
KRH26769	Soybean	endoplasmic reticulum	81.25	72.76
GSMUA_Achr5P26550_001	Banana	cytosol	19.58	72.31
PGSC0003DMT400074510	Potato	extracellular	80.0	70.98
KRH25361	Soybean	mitochondrion, nucleus	78.12	69.83
KRH56153	Soybean	mitochondrion, nucleus	78.12	69.83
GSMUA_Achr5P26560_001	Banana	extracellular	47.92	66.28
TraesCS7B01G359700.1	Wheat	extracellular	73.75	65.31
HORVU7Hr1G105620.1	Barley	extracellular	72.92	64.58
Os06t0678800-01	Rice	extracellular	72.71	64.39
TraesCS7D01G447200.1	Wheat	extracellular	72.71	64.39
TraesCS7A01G459400.1	Wheat	extracellular	72.92	64.34
Zm00001d014366_P002	Maize	extracellular	72.5	63.5
EER90222	Sorghum	extracellular	71.88	63.19
PGSC0003DMT400048000	Potato	extracellular	68.54	63.03
PGSC0003DMT400042483	Potato	extracellular	70.42	61.79
PGSC0003DMT400025805	Potato	extracellular	69.17	61.48
TraesCS2B01G274800.1	Wheat	vacuole	69.38	61.1
TraesCS2D01G230800.1	Wheat	extracellular	68.96	60.73
TraesCS2A01G224600.1	Wheat	extracellular	68.54	60.37
Os07t0510900-01	Rice	extracellular, peroxisome	58.33	60.34
HORVU2Hr1G047260.1	Barley	extracellular, golgi, vacuole	68.96	60.07
EER97278	Sorghum	extracellular, golgi	68.12	59.67
PGSC0003DMT400075620	Potato	extracellular	66.88	59.12
PGSC0003DMT400075398	Potato	extracellular	66.88	59.01
Zm00001d021599_P002	Maize	extracellular, plasma membrane, vacuole	67.5	58.06
Os07t0510833-00	Rice	extracellular	11.46	55.0
PGSC0003DMT400002004	Potato	extracellular	58.12	51.76
PGSC0003DMT400025973	Potato	extracellular	57.5	48.51
PGSC0003DMT400060352	Potato	extracellular	50.62	44.02
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	51.04	43.99
PGSC0003DMT400016672	Potato	endoplasmic reticulum	50.21	43.5
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	51.25	43.39
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	49.79	42.83
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	49.38	42.63
PGSC0003DMT400074313	Potato	extracellular	51.04	42.02
PGSC0003DMT400025541	Potato	extracellular	38.33	41.82
PGSC0003DMT400012216	Potato	extracellular, plasma membrane, vacuole	47.92	38.46
PGSC0003DMT400035984	Potato	plasma membrane	46.88	37.94

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	UniProt:M1CTS3	PFAM:PF00394
PFAM:PF07731	PFAM:PF07732	EnsemblPlantsGene:PGSC0003DMG400028958	PGSC:PGSC0003DMG400028958	EnsemblPlants:PGSC0003DMT400074506	PANTHER:PTHR11709
PANTHER:PTHR11709:SF106	SUPFAM:SSF49503	UniParc:UPI000296A5E0	SEG:seg	:	:

Description

Multicopper oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400028958]

Coordinates

chr7:-:46812737..46815355

Molecular Weight (calculated)

53458.0 Da

IEP (calculated)

6.445

GRAVY (calculated)

-0.197

Length

480 amino acids

Sequence
(BLAST)

001: MVMMFLHVNF IHGEDPYRFY TWNVTYGDIY PLGVKQQGIL INGQFPGPPI QCVTNDNLII NVFNNLDDSF LISWNGVEQR RNSWQDGVYG TNCPIPPGKN
101: FTYVLQVKDQ IGSFHYFPSL AFHKAAGGFG SINIASRSVI PVPFPPPAGE FTILTGDWFK QNHSDLKAIL DGGHDLPFPD GILINGRGSN GYTFTVDQGK
201: IYRFRISNVG LTTSVNFRIQ GHKMMVVEVE GTHTVQNTYD SLDIHLGQSY SVLLTADQPA QDYYIAVSTR FTSQVLTATS TLRYSNSAGS VSGPPPGGPT
301: IEIDWSFNQA RSLSVSFVPA DTPLKLADHF NIPGVFTLGS IPDSPTGSGA YLQTSVMAAD FRAYTEVIFE NLEDSVQSYH IDGHHFFVVG MGRGEWTPAS
401: RLTYNLRDTI SRSTVQVYPK SWTALYMPLD NVGMWNIRSQ NWARQYLGQQ FYLRVYSPVN SWRDENPIPS NALVCGRASS

Best Arabidopsis Sequence Match ( AT1G21850.1 )
(BLAST)

001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F

Arabidopsis Description

sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.