Factsheet for PGSC0003DMT400035984

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g083900.2.1	Tomato	extracellular	96.63	96.79
VIT_16s0022g00680.t01	Wine grape	plasma membrane	70.99	71.11
AT4G25240.1	Thale cress	plasma membrane	68.97	69.44
CDX89433	Canola	plasma membrane	69.48	68.9
Bra013877.1-P	Field mustard	plasma membrane	69.14	68.68
KRH56354	Soybean	extracellular	68.13	68.36
CDX94466	Canola	extracellular, plasma membrane, plastid, vacuole	68.8	68.11
KRH62611	Soybean	nucleus	67.79	67.91
CDX99917	Canola	plasma membrane	68.13	67.67
Bra029171.1-P	Field mustard	extracellular	66.27	67.18
CDY38866	Canola	extracellular	66.27	67.18
CDY46940	Canola	plasma membrane	67.12	66.67
AT5G51480.1	Thale cress	extracellular, plasma membrane	66.44	66.55
Bra022551.1-P	Field mustard	plasma membrane	66.95	66.5
CDX91586	Canola	extracellular	66.44	66.0
CDY64023	Canola	extracellular	65.09	65.98
PGSC0003DMT400012216	Potato	extracellular, plasma membrane, vacuole	65.77	65.22
PGSC0003DMT400074313	Potato	extracellular	61.21	62.26
CDY00478	Canola	cytosol	38.95	59.84
Bra034914.1-P	Field mustard	extracellular	6.91	52.56
CDY48940	Canola	extracellular	6.75	51.28
PGSC0003DMT400048000	Potato	extracellular	43.34	49.23
PGSC0003DMT400074510	Potato	extracellular	44.18	48.43
PGSC0003DMT400002004	Potato	extracellular	44.01	48.42
PGSC0003DMT400025805	Potato	extracellular	43.0	47.22
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	37.94	46.88
PGSC0003DMT400075398	Potato	extracellular	43.0	46.88
PGSC0003DMT400075620	Potato	extracellular	42.16	46.04
PGSC0003DMT400042483	Potato	extracellular	42.33	45.89
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	42.5	45.32
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	42.5	45.16
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	41.65	44.34
PGSC0003DMT400060352	Potato	extracellular	41.15	44.2
PGSC0003DMT400025973	Potato	extracellular	41.99	43.76
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	41.65	43.56
PGSC0003DMT400025541	Potato	extracellular	32.04	43.18
PGSC0003DMT400016672	Potato	endoplasmic reticulum	39.8	42.6

Protein Annotations

EntrezGene:102601589	Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	UniProt:M1B335	PFAM:PF00394
PFAM:PF07731	PFAM:PF07732	EnsemblPlantsGene:PGSC0003DMG400013855	PGSC:PGSC0003DMG400013855	EnsemblPlants:PGSC0003DMT400035984	PANTHER:PTHR11709
PANTHER:PTHR11709:SF123	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295036B	RefSeq:XP_006366164.1
SEG:seg	:	:	:	:	:

Description

Multicopper oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400013855]

Coordinates

chr3:+:39311456..39315542

Molecular Weight (calculated)

66083.5 Da

IEP (calculated)

7.052

GRAVY (calculated)

-0.160

Length

593 amino acids

Sequence
(BLAST)

001: MASSSLLVHR VCYIALFFTL CFAADPFVNF ELEYSYITAS PLGVPQQVVA VNGKFPGPIL NVTTNYNVVV DVKNKLDEDL LVTWSGIQMR RTSWQDGVLG
101: TNCPIPKGGW NFTYQFQVKD QIGSFFYAPS VNMQRAAGGF GSFIVTNRNI IPIPFSPPDG DIVIIIGDWY TRSHKTLRKD LDDGKQLGMP DGVLINGKGP
201: YRYNTTLVPD GIDHETINVD PGKTYRVRVH NVGVSTCLNF RIQNHNLLLV ETEGYYTSQQ NYTSVDIHVG QSYTFLVTMD QNASSDYYIV ASSRFVNQTI
301: WQKVTGVGIL HYSNSKGKAA GPLPDPPNDV YDTSYALNQA MSIRQNVSAS GARPNPQGSF HYGQINVTDF YLLKSVPPVS IDGKLRATFN GISFKNPVTP
401: IRLADLYYVK GDYKLDFPTK PMNRPPKVDT SIINATYKGF IEIVLQNNDT VVQSFHMDGY SFFVVGMGFG EWTENNRGSY NRWDAISRST TQVFPGGWTA
501: VLVSLDNVGV WNLRAENLDR WYLGQETYMR IINPEDHSNK TEMPVPDNAL YCGALASMQK QQKVSSATTT LFGSSELFFT LLLVLSAVIS LVS

Best Arabidopsis Sequence Match ( AT4G25240.2 )
(BLAST)

001: MAATCSLLAS FLLCFALLSA VSFAADPFVS YDFRVSYLTA SPLGVPQQVI AVNGQFPGPL LNATTNYNVV VNVFNHLDEP LLLTWPGIQM RRNSWQDGVL
101: GTNCPIPPRW NFTYQFQVKD QIGSFFYSPS LNFQRASGGF GPIVINNRDI IPIPFPQPDG ELIFIIGDWY TQDHKALRRA LDSGKELGMP DGVLINGKGP
201: YKYNSSVPDG IDYLTFHVEP GKTYRIRVHN VGISTSLNFR IQNHSLLLVE TEGHYTSQAN FTDFDVHVGQ SYSFLVTMDQ DATSDYYIVA SARFVNETVW
301: QRVTGVAILH YSNSKGPVSG PLPVPKTDVS SPWSAMSQPK TIRQNTSASG ARPNPQGSFH YGQINITNTY ILRSLPPTII NGALRATLNG ISFVNPSTPV
401: RLADRNKVKG AYKLDFPDRP FNRPLRLDRS MINATYKGFI QVVFQNNDTK IQSFHVDGYS FFVVGMDFGI WSEDKKGSYN NWDAISRSTI EVYPGGWTAV
501: LISLDNVGVW NIRVENLDRW YLGEETYMRI TNPEEDGKTE MDPPDNVLYC GALKNLQKEQ HHSAATSILN GHLKLMLLMV LLASVFRFC

Arabidopsis Description

SKS1SKS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTC9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.