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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029171.1-P Field mustard extracellular 99.66 99.66
CDY64023 Canola extracellular 95.38 95.38
CDX99917 Canola plasma membrane 84.44 82.75
CDX91586 Canola extracellular 82.56 80.9
CDY46940 Canola plasma membrane 82.05 80.4
AT5G51480.1 Thale cress extracellular, plasma membrane 79.15 78.21
CDX89433 Canola plasma membrane 76.92 75.25
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 76.75 74.96
CDY00478 Canola cytosol 48.89 74.09
PGSC0003DMT400035984 Potato plasma membrane 67.18 66.27
Solyc03g083900.2.1 Tomato extracellular 66.5 65.71
KRH62611 Soybean nucleus 65.98 65.2
KRH56354 Soybean extracellular 65.81 65.14
VIT_16s0022g00680.t01 Wine grape plasma membrane 65.13 64.36
CDX97339 Canola plasma membrane 64.44 64.33
CDY04429 Canola plasma membrane 64.1 63.99
CDX90830 Canola extracellular 63.93 63.93
CDY68876 Canola cytosol 12.14 63.39
CDY48757 Canola extracellular, plasma membrane, vacuole 56.07 55.13
CDY05676 Canola extracellular, plasma membrane, vacuole 55.73 54.7
CDY48940 Canola extracellular 6.5 48.72
CDY68850 Canola extracellular 25.13 48.51
CDX87633 Canola extracellular 44.62 48.24
CDX73238 Canola extracellular 44.62 48.24
CDY55201 Canola extracellular 45.13 48.09
CDY68834 Canola extracellular, vacuole 44.96 47.91
CDY67479 Canola extracellular 44.27 47.87
CDY35790 Canola extracellular 44.27 47.79
CDY68812 Canola cytosol, peroxisome 36.24 47.53
CDX79120 Canola extracellular 43.25 46.77
CDX82897 Canola extracellular 43.25 46.77
CDX69261 Canola extracellular 42.05 46.68
CDY43557 Canola extracellular 42.73 46.21
CDX72617 Canola extracellular 42.73 46.21
CDY42716 Canola extracellular 42.56 46.11
CDY31468 Canola extracellular 43.42 46.1
CDY18626 Canola extracellular 42.39 45.84
CDX81353 Canola extracellular 42.39 45.84
CDY49392 Canola extracellular 34.87 45.74
CDX75611 Canola extracellular 42.22 45.66
CDY38959 Canola extracellular 42.05 45.64
CDX75708 Canola extracellular 42.56 45.19
CDY01453 Canola extracellular, golgi 42.05 45.14
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 42.56 45.11
CDX82540 Canola extracellular 42.39 45.01
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 42.39 44.93
CDX82541 Canola extracellular, plasma membrane 42.56 44.86
CDY50029 Canola extracellular 41.37 44.81
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 42.05 44.81
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 42.05 44.81
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 42.05 44.73
CDX75707 Canola extracellular, plasma membrane, vacuole 42.39 44.68
CDY43995 Canola extracellular, plasma membrane 42.39 44.68
CDY12788 Canola extracellular 41.37 44.57
CDY43353 Canola extracellular, plasma membrane, vacuole 42.05 44.4
CDY39058 Canola extracellular 41.37 44.4
CDY23596 Canola extracellular, plasma membrane 42.05 44.32
CDY24189 Canola extracellular, plasma membrane, vacuole 41.88 44.22
CDY13534 Canola extracellular 41.2 44.22
CDX91548 Canola cytosol 37.44 44.06
CDY43352 Canola extracellular, plasma membrane 38.29 44.01
CDY54363 Canola extracellular 40.0 42.94
CDX97352 Canola mitochondrion 35.73 42.83
CDX89586 Canola mitochondrion 16.07 42.34
CDY64276 Canola cytosol 43.08 41.04
CDX89588 Canola cytosol 18.46 39.27
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 42.73 39.12
CDY16369 Canola mitochondrion 30.77 37.97
CDY29530 Canola plastid 39.32 37.95
CDY32795 Canola cytosol 6.32 35.58
CDX76855 Canola cytoskeleton, cytosol, extracellular 11.79 27.71
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078HMM9UniProt:A0A078HMM9EnsemblPlants:CDY38866ProteinID:CDY38866
ProteinID:CDY38866.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00066707001
InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF123
SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE4EF6SEG:seg:
Description
BnaA03g13130DBnaA03g13130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMM9]
Coordinates
chrLK032434:+:108474..110828
Molecular Weight (calculated)
65526.8 Da
IEP (calculated)
7.705
GRAVY (calculated)
-0.199
Length
585 amino acids
Sequence
(BLAST)
001: MSPPRFSIFA FALLFGLSLA EDPAISYVYE LSYVTASPLG VPQQVIAVNG IFPGPVVTAT TNYNVEVNVF NRLDEPLLLT WNGIEMRRNS WQDGVLGTNC
101: PIPPQWNFTY SFQVKDQIGS FFYFPSLNFQ RASGGFGPIV IDNQYRIPLP FATPDGEFTF MIGDWYTQNH TVLRSVLDSG KELAMPDGVL INGKGPYKYN
201: SSVPDGIQHE TVNVDPGKTY RIRVHNVGVS TSLNFRIQSH KLLLVETEGR YTSQTNFTDF DIHVGQSYSF LVTMDQNASS DYYIVASARF VDEEVWQRVT
301: GVGILHYSNS KGPASGPLPV PLTDVSHPWT VMNQQRAIKQ NTSSSGARPN PQGSYHYGQI NITGTYIFRS MPPTIINGSL RATLNGVSFL NPSTPMRLAD
401: KHRVKGVYKM DFPSRPVDSR PPRVGSSIIN ATYRRFVQII FQNNDTKVQS FHIDGYSFYV VAMDFGNWTE DRKGSYNNWD AIARSTIEVY PGAWTAVLMS
501: LDNAGVWNLR VENLDRWYLG QETYIRIINP EENGKTEMGQ PKNVLYCGAL KSLQKQQVHS SASSLLNGNL ILIFSFLMVL LASVC
Best Arabidopsis Sequence Match ( AT5G51480.1 )
(BLAST)
001: MAATDFFFAF VFSFALIFGF SFAGDPYVSY DFTLSYITAS PLGVPQQVIA VNGKFPGPVI NATTNYNVHV NVLNHLDEPL LLTWPGVQMR RNSWQDGVLG
101: TNCPIPPNWN FTYDFQLKDQ IGSYFYSPSL NFQRASGGFG ALIINNRDLV PIPFTEPDGE IIFIIGDWYT QNHTALRRIL DSGKELGMPD GVLINGKGPF
201: KYNSSVPDGI EHETVNVDPG KTYRIRVHNV GISTSLNFRI QNHKLLLIET EGRYTSQMNF TDFDVHVGQS YSFLVTMDQN ATSDYYIVAS ARFVNETVWQ
301: RVTGVGILHY SNSKGPASGP LPVSATDVNH PWSAMNQPRA IKQNTSASGA RPNPQGSFHY GQINITRTYI LRSLPPTKIN GKLRATLNGI SFVNPSTPMR
401: LADDHKVKGD YMLDFPDRPL DEKLPRLSSS IINATYKGFI QVIFQNNDTK IQSFHIDGYA FYVVAMDFGI WSEDRNSSYN NWDAVARSTV EVYPGAWTAV
501: LISLDNVGVW NIRVENLDRW YLGQETYMRI INPEENGSTE MDPPENVMYC GALQAMQKEQ HHSSATKSMT NGQLILIFSM MMVLLSSFSS FC
Arabidopsis Description
SKS2Monocopper oxidase-like protein SKS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN6]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.