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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033564.1-P Field mustard extracellular, mitochondrion, nucleus, plastid 96.91 93.11
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 96.91 93.11
AT4G38420.1 Thale cress extracellular 73.29 81.97
PGSC0003DMT400048000 Potato extracellular 60.59 71.26
VIT_03s0038g03570.t01 Wine grape extracellular 61.89 70.11
KRH24127 Soybean nucleus 61.89 69.85
KRH29100 Soybean nucleus 62.05 69.65
Solyc01g111970.2.1 Tomato extracellular 60.26 69.03
CDX73238 Canola extracellular 60.42 68.58
CDX87633 Canola extracellular 60.42 68.58
CDX91548 Canola cytosol 55.21 68.21
CDY67479 Canola extracellular 59.12 67.1
CDY35790 Canola extracellular 59.12 66.97
CDY55201 Canola extracellular 59.77 66.85
CDY68834 Canola extracellular, vacuole 59.77 66.85
GSMUA_Achr5P11580_001 Banana extracellular 58.14 66.23
CDX79120 Canola extracellular 57.17 64.88
CDX82897 Canola extracellular 57.0 64.69
CDY68876 Canola cytosol 11.73 64.29
CDY16369 Canola mitochondrion 48.37 62.66
CDY31468 Canola extracellular 55.37 61.71
CDY68812 Canola cytosol, peroxisome 40.88 56.28
CDY18626 Canola extracellular 48.7 55.27
CDX81353 Canola extracellular 48.53 55.08
CDY43557 Canola extracellular 48.21 54.71
CDY01453 Canola extracellular, golgi 47.39 53.39
CDY12788 Canola extracellular 46.74 52.85
CDX89586 Canola mitochondrion 19.06 52.7
CDY68850 Canola extracellular 25.9 52.48
CDY38959 Canola extracellular 44.95 51.21
CDY43352 Canola extracellular, plasma membrane 42.35 51.08
CDX82540 Canola extracellular 45.77 51.0
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 45.6 50.91
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 45.77 50.91
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 45.77 50.91
CDX75708 Canola extracellular 45.6 50.82
CDY50029 Canola extracellular 44.63 50.74
CDX82541 Canola extracellular, plasma membrane 45.77 50.63
CDX69261 Canola extracellular 43.32 50.47
CDX72617 Canola extracellular 44.46 50.46
CDY23596 Canola extracellular, plasma membrane 45.6 50.45
CDY24189 Canola extracellular, plasma membrane, vacuole 45.44 50.36
CDY43353 Canola extracellular, plasma membrane, vacuole 45.44 50.36
CDY29530 Canola plastid 49.67 50.33
CDY42716 Canola extracellular 44.14 50.19
CDY43995 Canola extracellular, plasma membrane 45.28 50.09
CDY49392 Canola extracellular 36.32 50.0
CDX75707 Canola extracellular, plasma membrane, vacuole 45.11 49.91
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 44.46 49.73
CDX97352 Canola mitochondrion 39.41 49.59
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 44.14 49.36
CDX75611 Canola extracellular 43.49 49.35
CDY54363 Canola extracellular 42.83 48.26
CDY13534 Canola extracellular 40.39 45.5
CDY39058 Canola extracellular 40.23 45.32
CDY05676 Canola extracellular, plasma membrane, vacuole 42.83 44.13
CDY48757 Canola extracellular, plasma membrane, vacuole 42.67 44.03
CDX97339 Canola plasma membrane 42.02 44.03
CDY04429 Canola plasma membrane 41.86 43.86
CDX90830 Canola extracellular 41.69 43.76
CDY32795 Canola cytosol 7.33 43.27
CDY38866 Canola extracellular 41.04 43.08
CDY64023 Canola extracellular 40.88 42.91
CDY46940 Canola plasma membrane 41.53 42.71
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 41.53 42.57
CDX91586 Canola extracellular 41.37 42.55
CDX89433 Canola plasma membrane 41.21 42.31
CDX89588 Canola cytosol 18.89 42.18
CDX99917 Canola plasma membrane 40.55 41.71
CDY00478 Canola cytosol 23.45 37.31
CDY48940 Canola extracellular 4.56 35.9
CDX76855 Canola cytoskeleton, cytosol, extracellular 14.01 34.54
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078JCR8UniProt:A0A078JCR8EnsemblPlants:CDY64276ProteinID:CDY64276
ProteinID:CDY64276.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00041068001InterPro:IPR008972PFAM:PF00394PFAM:PF07731
PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF64SUPFAM:SSF49503UniParc:UPI0004EDBAD7SEG:seg
Description
BnaCnng43630DBnaCnng43630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCR8]
Coordinates
chrLK034433:-:10027..16136
Molecular Weight (calculated)
69097.8 Da
IEP (calculated)
9.343
GRAVY (calculated)
-0.455
Length
614 amino acids
Sequence
(BLAST)
001: MADYSRASEQ QEADSAASKG CGIFEFLKKK PEDVSSSDVT KENKGEEKPS LAERIHSSST SDEESGENGE VKEKKKKKEK EKVFQAEDPY RFFDWRVTYS
101: NIYPLGIPQR GILINGQFPG PEIYSVTNDN LIINVHNDLD EPFLLSWNGV QLRKNSYQDG VYGTTCPIPP GKNYTYAIQV KDQIGSFFYF PSLAFHKAAG
201: AFGGLRVLSR PRIPVPFPEP AGDFTFLIGD WYSHHDHKNL KALLDRGHRL PLPDKVLING NGVNFSSSLT VDKGKTYRFR ISNVGLQHSL NFKIVDHQMK
301: LVEVEGTHTI QSMYSSLDIH VGQSYSVLVT MDQPEKDYSI VVATRFAAKK ILVGSTLHYS NSRQSLSSAS LSAMGPADEL DWSIKQARSI RTNLTASGPR
401: PNPQGSYHYG LINISRTLVL ESSAALVKRK QRYAINGVSF VHSDTPLKLA DYFNIRGVFK VGSIPDQPRR GGGGGIRLDT AVMGANHREF IEIVFQNREK
501: IVQSYHLDGY SFWVVGMDRG TWSHASRREY NLMDAVSRST TQVYPESWTA VYVALDNVGM WNLRSEFWAR QYLGQQLYLR VYSSVHSLRD EYLVPKNALL
601: CGRASNMQRP IITP
Best Arabidopsis Sequence Match ( AT4G38420.1 )
(BLAST)
001: MCWWLNGAVW TMMMMTISII SFVQADDPYR FFDWRVTYGN ISPLGIPQRG ILINGQYPGP DIYSVTNDNL IINVHNDLDE PFLLSWNGVQ LRKNSYQDGV
101: YGTTCPIPPG KNYTYAIQVK DQIGSFFYFP SLAVHKAAGG FGGFRILSRP RIPVPFPEPA GDFTFLIGDW FKHDHKVLKA ILDRGHKLPL PQGVLINGQG
201: VSYMSSITVH KGKTYRFRIS NVGLQHTLNF RIQGHQMKLV EVEGTHTVQS MYTSLDIHVG QSYSVLVTMD QPDQDYDIVV STKFVAKKLL VSSTIHYSNS
301: RHSHSSSANS VHVQQPADEL DWSIKQARSI RTNLTASGPR PNPQGSYHYG RIKISRTLIL ESSAALVKRK QRYAINGVSF VPGDTPLKLA DYFKIKGVFK
401: MGSIPDKPRR GRGMRMETSV MGAHHRDFLE IIFQNREKIV QSYHLDGYSF WVVGTDRGTW SKASRREYNL RDAISRSTTQ VYPESWTAVY VALDNVGMWN
501: LRSEYWARQY LGQQFYLRVY SPTHSLRDEY LLPKNALLCG RASNKHTTP
Arabidopsis Description
sks9Putative pectinesterase [Source:UniProtKB/TrEMBL;Acc:Q8VYB3]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.