CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, nucleus

Predictor Summary:

plastid 3
vacuole 1
nucleus 1
plasma membrane 1
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	100.0	100.0
CDY64276	Canola	cytosol	93.11	96.91
AT4G38420.1	Thale cress	extracellular	70.58	82.15
PGSC0003DMT400048000	Potato	extracellular	58.84	72.03
VIT_03s0038g03570.t01	Wine grape	extracellular	60.09	70.85
KRH24127	Soybean	nucleus	59.94	70.4
KRH29100	Soybean	nucleus	60.09	70.2
Solyc01g111970.2.1	Tomato	extracellular	58.53	69.78
CDX73238	Canola	extracellular	58.37	68.95
CDX87633	Canola	extracellular	58.37	68.95
CDX91548	Canola	cytosol	53.36	68.61
CDY67479	Canola	extracellular	57.12	67.47
CDY55201	Canola	extracellular	57.9	67.4
CDY68834	Canola	extracellular, vacuole	57.9	67.4
CDY35790	Canola	extracellular	57.12	67.34
GSMUA_Achr5P11580_001	Banana	extracellular	56.02	66.42
CDY68876	Canola	cytosol	11.42	65.18
CDX79120	Canola	extracellular	55.09	65.06
CDX82897	Canola	extracellular	54.93	64.88
CDY16369	Canola	mitochondrion	46.48	62.66
CDY31468	Canola	extracellular	53.68	62.25
CDY68812	Canola	cytosol, peroxisome	39.28	56.28
CDY18626	Canola	extracellular	47.1	55.64
CDX81353	Canola	extracellular	46.95	55.45
CDY43557	Canola	extracellular	46.48	54.9
CDY01453	Canola	extracellular, golgi	45.7	53.58
CDY12788	Canola	extracellular	45.07	53.04
CDY68850	Canola	extracellular	25.04	52.81
CDX89586	Canola	mitochondrion	18.31	52.7
CDY43352	Canola	extracellular, plasma membrane	40.85	51.28
CDY38959	Canola	extracellular	43.19	51.21
CDX82540	Canola	extracellular	44.13	51.18
CDY50029	Canola	extracellular	43.19	51.11
CDY24188	Canola	endoplasmic reticulum, extracellular, plasma membrane	43.98	51.09
CDY23597	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.13	51.09
CDY43994	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.13	51.09
CDX75708	Canola	extracellular	43.98	51.0
CDX82541	Canola	extracellular, plasma membrane	44.29	50.99
CDY23596	Canola	extracellular, plasma membrane	44.13	50.81
CDY24189	Canola	extracellular, plasma membrane, vacuole	43.98	50.72
CDY43353	Canola	extracellular, plasma membrane, vacuole	43.98	50.72
CDY29530	Canola	plastid	48.04	50.66
CDX72617	Canola	extracellular	42.72	50.46
CDY43995	Canola	extracellular, plasma membrane	43.82	50.45
CDY49392	Canola	extracellular	35.21	50.45
CDX69261	Canola	extracellular	41.47	50.28
CDX75707	Canola	extracellular, plasma membrane, vacuole	43.66	50.27
CDY42716	Canola	extracellular	42.41	50.19
CDX97352	Canola	mitochondrion	38.03	49.8
CDY10549	Canola	endoplasmic reticulum, extracellular, plasma membrane	42.72	49.73
CDY56013	Canola	endoplasmic reticulum, extracellular, plasma membrane	42.41	49.36
CDX75611	Canola	extracellular	41.78	49.35
CDY54363	Canola	extracellular	41.47	48.62
CDY13534	Canola	extracellular	38.97	45.69
CDY39058	Canola	extracellular	38.81	45.5
CDY05676	Canola	extracellular, plasma membrane, vacuole	41.16	44.13
CDY48757	Canola	extracellular, plasma membrane, vacuole	41.0	44.03
CDX97339	Canola	plasma membrane	40.38	44.03
CDX90830	Canola	extracellular	40.22	43.93
CDY04429	Canola	plasma membrane	40.22	43.86
CDY32795	Canola	cytosol	7.04	43.27
CDY38866	Canola	extracellular	39.12	42.73
CDY64023	Canola	extracellular	38.97	42.56
CDX89588	Canola	cytosol	18.31	42.55
CDX94466	Canola	extracellular, plasma membrane, plastid, vacuole	39.75	42.4
CDY46940	Canola	plasma membrane	39.59	42.38
CDX89433	Canola	plasma membrane	39.59	42.31
CDX91586	Canola	extracellular	39.44	42.21
CDX99917	Canola	plasma membrane	38.81	41.54
CDY00478	Canola	cytosol	22.38	37.05
CDY48940	Canola	extracellular	4.38	35.9
CDX76855	Canola	cytoskeleton, cytosol, extracellular	13.62	34.94

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	GO:A0A078IXB7	UniProt:A0A078IXB7	EnsemblPlants:CDY54804	ProteinID:CDY54804
ProteinID:CDY54804.1	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:CuRO_3_AO-like
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00014673001	InterPro:IPR008972	PFAM:PF00394
PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF64	SUPFAM:SSF49503	UniParc:UPI000253F953
SEG:seg	:	:	:	:	:

Description

BnaA06g40970DBnaA06g40970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXB7]

Coordinates

chrLK033351:+:48682..53595

Molecular Weight (calculated)

72035.2 Da

IEP (calculated)

9.472

GRAVY (calculated)

-0.441

Length

639 amino acids

Sequence
(BLAST)

001: MYFFALLIEY RGPPTPSIHW SAQRRTADYS RASEQQEADS AASKGCGIFE FLKKKPEDVP SSDVTKENKG EEKPSLAERI HLFDSSSSSD EESGENGEVK
101: EKKRKKAEGE VQAEDPYRFF DWRVTYGNIY PLGIPQRGIL INGQFPGPEI YSVTNDNLII NVHNDLDEPF LLSWNGVQLR KNSYQDGVYG TTCPIPPGKN
201: YTYAIQVKDQ IGSFFYFPSL AFHKAAGAFG GLRVLSRPRI PVPFPEPAGD FTFLIGDWYS QHDHKNLKAL LDRGHRLPFP DKVLINGNGV NFSSSLTVHK
301: GKTYRFRISN VGLQHSLNFK IVDHQMKLVE VEGTHTIQSM YSSLDIHVGQ SYSVLVTMDQ PEKDYSIVVA TRFAAKKILV GSTLHYSNSR QSLSSASLSA
401: RGPADELDWS IKQARSIRTN LTASGPRPNP QGSYHYGLIN ISRTLVLESS AGLVKRKQRY AINGVSFVHS DTPLKLADYF NIRGVFKVGS IPDQPRRGGG
501: IRLDTAVMGA NHRAFIEIVF QNREKIVQSY HLDGYSFWVV GMDRGTWSHA SRREYNLVDA VSRSTTQVYP ESWTAVYVAL DNVGMWNLRS EFWARQYLGQ
601: QLYLRVYSSV HSLRDEYLVP KNALLCGRAS NMQRPIITP

Best Arabidopsis Sequence Match ( AT4G38420.1 )
(BLAST)

001: MCWWLNGAVW TMMMMTISII SFVQADDPYR FFDWRVTYGN ISPLGIPQRG ILINGQYPGP DIYSVTNDNL IINVHNDLDE PFLLSWNGVQ LRKNSYQDGV
101: YGTTCPIPPG KNYTYAIQVK DQIGSFFYFP SLAVHKAAGG FGGFRILSRP RIPVPFPEPA GDFTFLIGDW FKHDHKVLKA ILDRGHKLPL PQGVLINGQG
201: VSYMSSITVH KGKTYRFRIS NVGLQHTLNF RIQGHQMKLV EVEGTHTVQS MYTSLDIHVG QSYSVLVTMD QPDQDYDIVV STKFVAKKLL VSSTIHYSNS
301: RHSHSSSANS VHVQQPADEL DWSIKQARSI RTNLTASGPR PNPQGSYHYG RIKISRTLIL ESSAALVKRK QRYAINGVSF VPGDTPLKLA DYFKIKGVFK
401: MGSIPDKPRR GRGMRMETSV MGAHHRDFLE IIFQNREKIV QSYHLDGYSF WVVGTDRGTW SKASRREYNL RDAISRSTTQ VYPESWTAVY VALDNVGMWN
501: LRSEYWARQY LGQQFYLRVY SPTHSLRDEY LLPKNALLCG RASNKHTTP

Arabidopsis Description

sks9Putative pectinesterase [Source:UniProtKB/TrEMBL;Acc:Q8VYB3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.