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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038001.1-P Field mustard extracellular, vacuole 98.7 96.04
CDY68876 Canola cytosol 19.81 95.54
CDY54363 Canola extracellular 95.0 94.13
CDX97352 Canola mitochondrion 81.3 89.96
AT1G55570.1 Thale cress extracellular, plasma membrane 92.04 89.55
CDX82541 Canola extracellular, plasma membrane 89.26 86.85
CDY23596 Canola extracellular, plasma membrane 88.52 86.13
CDX75707 Canola extracellular, plasma membrane, vacuole 88.15 85.77
CDY43995 Canola extracellular, plasma membrane 88.15 85.77
CDY24189 Canola extracellular, plasma membrane, vacuole 87.22 85.02
CDY43353 Canola extracellular, plasma membrane, vacuole 87.04 84.84
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 76.3 75.05
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 75.93 74.68
CDX75708 Canola extracellular 75.56 74.05
CDX82540 Canola extracellular 75.37 73.87
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 74.81 73.19
CDY43352 Canola extracellular, plasma membrane 68.89 73.08
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 74.63 73.01
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 74.26 72.91
CDY68850 Canola extracellular 40.37 71.95
CDY49392 Canola extracellular 58.33 70.63
VIT_00s1309g00010.t01 Wine grape vacuole 70.19 68.91
VIT_00s1643g00010.t01 Wine grape vacuole 70.19 68.91
GSMUA_Achr5P27810_001 Banana extracellular 67.04 68.69
HORVU4Hr1G048550.1 Barley cytosol, extracellular 7.96 68.25
GSMUA_Achr8P01580_001 Banana extracellular 65.19 68.22
GSMUA_Achr11P... Banana vacuole 66.3 67.93
GSMUA_Achr9P04930_001 Banana endoplasmic reticulum, extracellular, plasma membrane 65.37 67.37
PGSC0003DMT400041845 Potato extracellular, plasma membrane, vacuole 68.15 65.95
PGSC0003DMT400002554 Potato endoplasmic reticulum, extracellular, golgi 67.22 65.29
Solyc03g063150.2.1 Tomato unclear 66.85 64.93
Solyc11g008860.1.1 Tomato extracellular 66.67 64.86
GSMUA_Achr8P09380_001 Banana extracellular 62.96 64.76
GSMUA_AchrUn_... Banana extracellular 62.96 64.52
CDY32795 Canola cytosol 12.41 64.42
Solyc01g056310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 65.37 63.72
PGSC0003DMT400016672 Potato endoplasmic reticulum 65.19 63.54
Solyc01g005510.2.1 Tomato extracellular, plasma membrane, vacuole 65.19 63.2
GSMUA_Achr9P16870_001 Banana extracellular, plasma membrane, vacuole 65.0 63.02
GSMUA_Achr11P... Banana extracellular 61.67 62.95
PGSC0003DMT400060352 Potato extracellular 64.26 62.86
PGSC0003DMT400082031 Potato extracellular, plasma membrane, vacuole 64.81 62.84
GSMUA_Achr10P... Banana extracellular, golgi 65.37 62.59
Solyc05g055710.2.1 Tomato extracellular 52.22 62.11
PGSC0003DMT400010905 Potato extracellular, plasma membrane 64.81 61.73
Solyc05g055720.1.1 Tomato nucleus 10.19 61.11
HORVU3Hr1G080360.1 Barley extracellular, golgi, vacuole 60.93 59.07
TraesCS3D01G333700.1 Wheat extracellular, golgi, vacuole 60.56 58.81
TraesCS3B01G371800.1 Wheat extracellular, golgi, vacuole 60.37 58.63
GSMUA_Achr3P09610_001 Banana plastid 66.3 58.59
Zm00001d043090_P001 Maize vacuole 60.37 58.53
TraesCS3A01G340200.1 Wheat extracellular, golgi, vacuole 60.0 58.48
EES01652 Sorghum extracellular, golgi, vacuole 60.37 58.42
HORVU1Hr1G069130.1 Barley extracellular, golgi, plasma membrane 60.56 58.39
Os01t0816700-01 Rice plasma membrane 59.63 58.23
TraesCS1B01G314600.1 Wheat plasma membrane 60.19 58.14
Zm00001d012524_P001 Maize vacuole 60.19 58.14
Zm00001d038521_P001 Maize extracellular, plasma membrane, vacuole 59.81 57.78
TraesCS1D01G303600.1 Wheat extracellular 59.63 57.6
EES19711 Sorghum extracellular 59.44 57.42
TraesCS1A01G304100.1 Wheat extracellular, golgi, plasma membrane 59.26 57.25
Zm00001d010630_P003 Maize extracellular, golgi, vacuole 60.37 57.19
GSMUA_Achr5P07530_001 Banana extracellular, golgi, vacuole 64.63 55.84
CDX73238 Canola extracellular 54.26 54.16
CDX87633 Canola extracellular 54.07 53.97
CDY68812 Canola cytosol, peroxisome 44.07 53.36
CDY43557 Canola extracellular 53.15 53.05
CDX81353 Canola extracellular 52.96 52.87
CDY18626 Canola extracellular 52.96 52.87
CDY67479 Canola extracellular 52.96 52.87
CDY35790 Canola extracellular 52.96 52.77
CDY31468 Canola extracellular 53.7 52.63
CDY12788 Canola extracellular 52.78 52.49
CDY01453 Canola extracellular, golgi 52.78 52.29
CDY68834 Canola extracellular, vacuole 53.15 52.28
CDY55201 Canola extracellular 52.96 52.09
CDX69261 Canola extracellular 50.0 51.23
CDY42716 Canola extracellular 50.93 50.93
CDY38959 Canola extracellular 50.56 50.65
CDX72617 Canola extracellular 50.74 50.65
CDX82897 Canola extracellular 50.56 50.46
CDX79120 Canola extracellular 50.37 50.28
CDX75611 Canola extracellular 50.0 49.91
CDX89588 Canola cytosol 22.96 45.09
CDY64276 Canola cytosol 50.74 44.63
CDX89586 Canola mitochondrion 18.33 44.59
CDY13534 Canola extracellular 44.81 44.4
CDY39058 Canola extracellular 44.81 44.4
CDX91548 Canola cytosol 40.74 44.27
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 51.11 43.19
CDX97339 Canola plasma membrane 46.3 42.66
Zm00001d047156_P002 Maize cytosol 15.93 42.57
CDY48757 Canola extracellular, plasma membrane, vacuole 46.85 42.52
CDY04429 Canola plasma membrane 46.11 42.49
CDX90830 Canola extracellular 45.93 42.39
CDY48940 Canola extracellular 6.11 42.31
CDY05676 Canola extracellular, plasma membrane, vacuole 46.67 42.28
CDY29530 Canola plastid 47.41 42.24
CDY46940 Canola plasma membrane 46.67 42.21
CDX91586 Canola extracellular 46.11 41.71
CDY38866 Canola extracellular 44.81 41.37
CDY64023 Canola extracellular 44.81 41.37
CDX99917 Canola plasma membrane 44.81 40.54
CDX89433 Canola plasma membrane 44.26 39.97
CDY16369 Canola mitochondrion 35.0 39.87
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 44.07 39.73
Zm00001d037444_P001 Maize mitochondrion 18.52 37.31
CDY00478 Canola cytosol 25.19 35.23
Os05t0485800-00 Rice plasma membrane 40.56 32.16
Zm00001d004806_P001 Maize plastid 4.81 30.59
CDX76855 Canola cytoskeleton, cytosol, extracellular 14.07 30.52
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078IKZ1UniProt:A0A078IKZ1EnsemblPlants:CDY50029ProteinID:CDY50029
ProteinID:CDY50029.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_2_AO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00095781001InterPro:IPR008972PFAM:PF00394PFAM:PF07731
PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF27SUPFAM:SSF49503SignalP:SignalP-noTMUniParc:UPI0004EE4EFC
SEG:seg:::::
Description
BnaA06g00300DBnaA06g00300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKZ1]
Coordinates
chrLK032875:-:72066..74554
Molecular Weight (calculated)
60595.1 Da
IEP (calculated)
8.983
GRAVY (calculated)
-0.380
Length
540 amino acids
Sequence
(BLAST)
001: MKGGVKLWAL CLCLAMTTVV MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN LNSTSNNNII VNVFNNLDEP FLLTWNGIQH RKNSWQAGTA
101: GTMCPIPPGT NFTYHFQPKD QIGSYFYYPT TAMHRAAGAF GGLRVNSRLL IPVPYADPED DYTVLINDWY TESHTQLKNF LDSGRTIGRP DGILINGKAG
201: KGDGSDQPLF TLKQGKTYRI RICNVGLKAS LNFRIQNHKM KLVEMEGSHV LQNDYDSLDV HVGQCFGVIL TANQEPKDYY IVASTRFLKN ALTTTGLLRY
301: EGGKGLASSQ LPAAPVGWAW SLNQFRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN TQGKVDSKLR YALNGVSHID LETPLKLAEY FGVTDKVFKY
401: DSISDNPTSD QIKNIKIEPN NHERSVQSWH LDGYSFFAVA VEPGTWTPEK RKNYNLLDAV SRHTIQVYPK CWAAILLTFD NCGMWNIRSE NSERRYLGQQ
501: LYASVLSPEK SLRDEYNMPE SSLQCGLVKD KPKINPYAGA
Best Arabidopsis Sequence Match ( AT1G55570.1 )
(BLAST)
001: MKGGVKLLAV CLCVATATVM MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN INSTSNNNVI VNVFNNLDEP FLITWAGIQH RKNCWQDGTA
101: GTMCPIPPGQ NFTYHFQPKD QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF LDSGRTIGRP DGILINGKSG
201: KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY
301: EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY
401: DTISDNPNPD QIKNIKIEPN VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV QVYPKCWAAI LLTFDNCGMW
501: NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC GLVKGKPKVN PYAGA
Arabidopsis Description
sks12At1g55570/T5A14_1 [Source:UniProtKB/TrEMBL;Acc:Q9ZVV4]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.