Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, vacuole
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043090_P001 Maize vacuole 92.47 92.64
Zm00001d012524_P001 Maize vacuole 90.68 90.52
Os01t0816700-01 Rice plasma membrane 77.78 78.48
TraesCS3A01G340200.1 Wheat extracellular, golgi, vacuole 75.99 76.53
TraesCS3B01G371800.1 Wheat extracellular, golgi, vacuole 76.16 76.44
TraesCS3D01G333700.1 Wheat extracellular, golgi, vacuole 76.16 76.44
HORVU3Hr1G080360.1 Barley extracellular, golgi, vacuole 75.63 75.76
EES19711 Sorghum extracellular 72.58 72.45
GSMUA_Achr5P27810_001 Banana extracellular 62.19 65.84
GSMUA_Achr8P01580_001 Banana extracellular 60.75 65.7
GSMUA_Achr11P... Banana vacuole 61.65 65.28
GSMUA_Achr9P04930_001 Banana endoplasmic reticulum, extracellular, plasma membrane 61.11 65.08
CDY68876 Canola cytosol 12.9 64.29
CDY23596 Canola extracellular, plasma membrane 62.54 62.88
VIT_00s1643g00010.t01 Wine grape vacuole 61.83 62.73
VIT_00s1309g00010.t01 Wine grape vacuole 61.83 62.73
CDY43995 Canola extracellular, plasma membrane 62.37 62.7
CDX82541 Canola extracellular, plasma membrane 61.83 62.16
Bra001503.1-P Field mustard extracellular, plasma membrane 61.83 62.16
CDX75707 Canola extracellular, plasma membrane, vacuole 61.65 61.98
AT3G13390.1 Thale cress extracellular, plasma membrane, vacuole 61.47 61.91
GSMUA_Achr10P... Banana extracellular, golgi 62.37 61.7
PGSC0003DMT400002554 Potato endoplasmic reticulum, extracellular, golgi 61.29 61.51
AT1G55570.1 Thale cress extracellular, plasma membrane 61.11 61.44
CDY68850 Canola extracellular 33.33 61.39
CDY43352 Canola extracellular, plasma membrane 55.73 61.1
CDX97352 Canola mitochondrion 53.41 61.07
Solyc01g005510.2.1 Tomato extracellular, plasma membrane, vacuole 60.93 61.04
PGSC0003DMT400082031 Potato extracellular, plasma membrane, vacuole 60.93 61.04
PGSC0003DMT400016672 Potato endoplasmic reticulum 60.57 61.01
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 59.86 60.84
KRH50513 Soybean vacuole 59.86 60.73
GSMUA_Achr9P16870_001 Banana extracellular, plasma membrane, vacuole 60.57 60.68
AT1G55560.1 Thale cress extracellular 59.68 60.66
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 59.68 60.66
Solyc03g063150.2.1 Tomato unclear 60.39 60.61
Bra030849.1-P Field mustard cytosol 17.92 60.61
PGSC0003DMT400041845 Potato extracellular, plasma membrane, vacuole 60.57 60.57
Bra038001.1-P Field mustard extracellular, vacuole 60.22 60.54
Bra030850.1-P Field mustard plasma membrane 59.5 60.47
Solyc01g056310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 60.04 60.47
CDY24189 Canola extracellular, plasma membrane, vacuole 60.04 60.47
CDX75708 Canola extracellular 59.68 60.44
CDY50029 Canola extracellular 58.42 60.37
Bra039388.1-P Field mustard extracellular, plasma membrane, vacuole 59.86 60.29
AT3G13400.1 Thale cress extracellular, plasma membrane 59.5 60.25
CDX82540 Canola extracellular 59.5 60.25
CDY43353 Canola extracellular, plasma membrane, vacuole 59.68 60.11
Bra001504.1-P Field mustard extracellular 59.32 60.07
Solyc05g055720.1.1 Tomato nucleus 9.68 60.0
KRG89471 Soybean mitochondrion 59.86 59.96
Bra002825.1-P Field mustard extracellular, golgi, vacuole 59.5 59.93
CDY49392 Canola extracellular 47.85 59.87
KRH31599 Soybean extracellular 59.14 59.78
Solyc11g008860.1.1 Tomato extracellular 59.32 59.64
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 58.78 59.64
KRH50514 Soybean endoplasmic reticulum, extracellular, vacuole 58.96 59.6
PGSC0003DMT400010905 Potato extracellular, plasma membrane 60.39 59.44
Bra039389.1-P Field mustard plasma membrane 55.38 59.42
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 58.78 59.42
Bra034679.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 58.78 59.42
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 58.78 59.42
Bra034680.1-P Field mustard extracellular, plasma membrane 58.6 59.13
PGSC0003DMT400060352 Potato extracellular 58.24 58.88
CDY54363 Canola extracellular 57.35 58.72
Solyc05g055710.2.1 Tomato extracellular 47.31 58.15
CDY32795 Canola cytosol 10.57 56.73
Bra002824.1-P Field mustard cytosol 10.75 56.6
GSMUA_Achr5P07530_001 Banana extracellular, golgi, vacuole 60.57 54.08
GSMUA_Achr3P09610_001 Banana plastid 59.14 54.01
EER97278 Sorghum extracellular, golgi 49.46 50.37
EER90222 Sorghum extracellular 48.21 49.27
OQU88350 Sorghum extracellular 48.21 48.64
EES12655 Sorghum extracellular 49.82 48.1
KXG24449 Sorghum cytosol, nucleus, vacuole 38.71 42.77
EER89036 Sorghum plasma membrane 44.98 42.54
EER93966 Sorghum extracellular 44.98 41.9
EER92264 Sorghum extracellular 43.01 40.68
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10EntrezGene:8055293UniProt:C5XN79InterPro:Cu-oxidaseInterPro:Cu-oxidase_2
InterPro:Cu-oxidase_3InterPro:CupredoxinEnsemblPlants:EES01652ProteinID:EES01652ProteinID:EES01652.1GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0005618GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0009505GO:GO:0009506GO:GO:0016491GO:GO:0016722
GO:GO:0030312GO:GO:0055114InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732
PANTHER:PTHR11709PANTHER:PTHR11709:SF127EnsemblPlantsGene:SORBI_3003G335200SUPFAM:SSF49503unigene:Sbi.15531SignalP:SignalP-noTM
UniParc:UPI0001A84588RefSeq:XP_002456532.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:+:65856615..65859309
Molecular Weight (calculated)
62008.3 Da
IEP (calculated)
8.815
GRAVY (calculated)
-0.240
Length
558 amino acids
Sequence
(BLAST)
001: MVWSAGRMAM RGASAALLVL ALVAAVARAE DPYHFFEWKV TYGTKTIMGT PQKVILINDM LPGPTINCTS NNNIVINVFN MLDQPLLFTW HGIQQRKNSW
101: QDGMPGTMCP IQPNTNFTYH WQPKDQIGSF VYYPSTGMQR AAGAYGLISV HSRDLIPVPF DRPADDFPVL VGDWYTKDHA VLAKNLDAGK GIGRPSGLVI
201: NGKNEKDAAN PPMYNVEAGK TYRFRICNVG MKASINIGIQ NHIMKLVEME GSHTMQNDYD SLDIHVGQCL SVLVTADQKP GDYLLVASTR FIKEVSTTTA
301: VIRYKGASAP PPAKLPESPS GWAWSINQAR SFRWNLTASA ARPNPQGSYH YGQINITRTI RLGIGRGKVD GKERFGINGV SHVDPETPVK LAEYFNATDG
401: VFQYDLIGDV PPAKSAPTKM APNVLRAEFR TFIEVVFENP EKSIDTFHID GYAFFAVGMG PGKWTPACRS TYNLLDTVSR HTVQVYPRSW TAVMMTFDNA
501: GMWSIRSNIW ERNYLGEQLY ISVTSPERSL RDEYNMPETS LRCGKVVGLP LPPSYLSV
Best Arabidopsis Sequence Match ( AT1G55570.1 )
(BLAST)
001: MKGGVKLLAV CLCVATATVM MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN INSTSNNNVI VNVFNNLDEP FLITWAGIQH RKNCWQDGTA
101: GTMCPIPPGQ NFTYHFQPKD QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF LDSGRTIGRP DGILINGKSG
201: KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY
301: EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY
401: DTISDNPNPD QIKNIKIEPN VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV QVYPKCWAAI LLTFDNCGMW
501: NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC GLVKGKPKVN PYAGA
Arabidopsis Description
sks12At1g55570/T5A14_1 [Source:UniProtKB/TrEMBL;Acc:Q9ZVV4]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.