CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029193_P001	Maize	mitochondrion	95.93	81.91
TraesCS3A01G085900.1	Wheat	extracellular	82.03	81.62
TraesCS3B01G101500.1	Wheat	extracellular	82.37	81.54
TraesCS3D01G086400.1	Wheat	extracellular	82.03	81.07
Os01t0100400-01	Rice	extracellular, plasma membrane, vacuole	80.0	79.6
HORVU3Hr1G015510.2	Barley	cytosol	47.63	78.71
TraesCS3B01G101200.1	Wheat	extracellular	81.53	75.39
PGSC0003DMT400074313	Potato	extracellular	70.0	70.84
GSMUA_Achr3P17240_001	Banana	cytosol	71.02	70.78
VIT_07s0141g00540.t01	Wine grape	extracellular	71.19	70.59
Solyc09g055930.2.1	Tomato	extracellular	69.32	70.03
CDY48757	Canola	extracellular, plasma membrane, vacuole	66.78	66.22
CDY05676	Canola	extracellular, plasma membrane, vacuole	66.78	66.11
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	66.61	66.05
KRH46577	Soybean	mitochondrion	71.19	65.93
EER93966	Sorghum	extracellular	65.59	64.61
EER89036	Sorghum	plasma membrane	62.88	62.88
AT5G48450.1	Thale cress	extracellular	63.73	60.55
KXG24449	Sorghum	cytosol, nucleus, vacuole	51.36	60.0
EER90222	Sorghum	extracellular	45.76	49.45
EER97278	Sorghum	extracellular, golgi	44.41	47.81
OQU88350	Sorghum	extracellular	44.58	47.56
EES19711	Sorghum	extracellular	43.05	45.44
EES12655	Sorghum	extracellular	44.24	45.16
EES01652	Sorghum	extracellular, golgi, vacuole	40.68	43.01

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EntrezGene:8082645	UniProt:C5WZR5	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2
InterPro:Cu-oxidase_3	InterPro:Cupredoxin	EnsemblPlants:EER92264	ProteinID:EER92264	ProteinID:EER92264.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0016020	GO:GO:0016491	GO:GO:0016722
GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF58	EnsemblPlantsGene:SORBI_3001G369800	SUPFAM:SSF49503	unigene:Sbi.5492	SignalP:SignalP-noTM	UniParc:UPI0001A820F3
RefSeq:XP_002465266.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:65831915..65835451

Molecular Weight (calculated)

65403.4 Da

IEP (calculated)

6.003

GRAVY (calculated)

-0.105

Length

590 amino acids

Sequence
(BLAST)

001: MPPLLLLLLL AAALALAPAP ARSGDPYAYY DWEVSYVSAQ PLGVKQKVIG INGQFPGPPL NVTTNWNVVV NVRNALDEPL LLTWNGVQQR KTAWQDGVLG
101: TNCAIPAGWN WTYTFQVKDQ VGSFFYFPST PLHRAAGGYG AITINNRDVI PIPFGFPDGD ITLFIGDWYN RGHRELRRAL DGGTLLGAPD GVLVNGFGPY
201: QYNQSVVPPG IVYERINVEP GKTYRFRVHN VGVSTSLNFR IQNHNLLLVE TEGSYTSQQN YTNLDIHVSQ SYSFLVTMDQ NASTDYYVVA SARFVDAAVV
301: DKLTGVAILH YSNSQGPASG PLPDPPNDQY DTAFSINQAR SIRWNVTASG ARPNPQGSFH YGDITVTDVY LLQSRAPELI DGKLRSTLNE ISYIAPSTPL
401: VLAQIFNVPG VFKLDFPNHP MNRLPKVDTS IINGTYKGFM EIIFQNNATN VQSYHLDGYA FFVVGMDYGL WTENSRGTYN KWDGVARSTI QVFPGAWTAI
501: LVFLDNAGIW NLRVQNLDTW YLGQEVYINV VNPEDNSSTI PDNAIFCGAL SSLQKEQSHR FQYSEATPVP LWGKTVSLLV LLACFALWSR

Best Arabidopsis Sequence Match ( AT5G48450.1 )
(BLAST)

001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VNINRLCNTK KILDSTAKAQ
601: TDLSLVETDR ISEKNRDRIS Y

Arabidopsis Description

sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.