Factsheet for VIT_07s0141g00540.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074313	Potato	extracellular	76.47	78.04
Solyc09g055930.2.1	Tomato	extracellular	75.46	76.88
KRH46577	Soybean	mitochondrion	81.01	75.67
CDY05676	Canola	extracellular, plasma membrane, vacuole	74.96	74.83
CDY48757	Canola	extracellular, plasma membrane, vacuole	74.79	74.79
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	74.62	74.62
GSMUA_Achr3P17240_001	Banana	cytosol	73.78	74.16
EER92264	Sorghum	extracellular	70.59	71.19
TraesCS3A01G085900.1	Wheat	extracellular	70.42	70.66
TraesCS3D01G086400.1	Wheat	extracellular	70.25	70.02
TraesCS3B01G101500.1	Wheat	extracellular	70.08	69.97
AT5G48450.1	Thale cress	extracellular	71.93	68.92
VIT_02s0154g00080.t01	Wine grape	extracellular	68.4	68.87
Os01t0100400-01	Rice	extracellular, plasma membrane, vacuole	68.24	68.47
HORVU3Hr1G015510.2	Barley	cytosol	40.0	66.67
TraesCS3B01G101200.1	Wheat	extracellular	70.25	65.52
VIT_16s0022g00680.t01	Wine grape	plasma membrane	62.35	62.67
Zm00001d029193_P001	Maize	mitochondrion	71.09	61.22
VIT_10s0116g01600.t01	Wine grape	extracellular, mitochondrion	10.76	52.03
VIT_03s0038g03570.t01	Wine grape	extracellular	46.22	50.74
VIT_10s0116g01610.t01	Wine grape	extracellular	45.88	50.56
VIT_12s0059g00770.t01	Wine grape	extracellular	45.88	50.46
VIT_18s0001g00470.t01	Wine grape	extracellular	45.88	50.46
VIT_00s0253g00040.t01	Wine grape	extracellular	44.71	49.63
VIT_00s1309g00010.t01	Wine grape	vacuole	45.71	49.45
VIT_00s1643g00010.t01	Wine grape	vacuole	45.71	49.45
VIT_13s0019g05180.t01	Wine grape	cytosol	41.85	47.43
VIT_00s0253g00050.t01	Wine grape	extracellular, mitochondrion	43.87	43.43

Protein Annotations

EntrezGene:100265830	wikigene:100265830	Gene3D:2.60.40.420	MapMan:50.1.10	ProteinID:CBI35585	ProteinID:CBI35585.3
InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	UniProt:D7TYL0
EMBL:FN596270	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491
GO:GO:0016722	GO:GO:0046658	GO:GO:0055114	InterPro:IPR008972	EntrezGene:LOC100265830	wikigene:LOC100265830
PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF58	SUPFAM:SSF49503
SignalP:SignalP-noTM	UniParc:UPI0001BE41B4	ArrayExpress:VIT_07s0141g00540	EnsemblPlantsGene:VIT_07s0141g00540	EnsemblPlants:VIT_07s0141g00540.t01	RefSeq:XP_002269725
RefSeq:XP_002269725.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7_random:-:315341..323662

Molecular Weight (calculated)

66588.9 Da

IEP (calculated)

6.607

GRAVY (calculated)

-0.134

Length

595 amino acids

Sequence
(BLAST)

001: MLSTLHSASL FSSLILLSIF NYAFAEDPFV FYDWKVSYIT ASPFGVKQQV IAVNGQFPGP ILNVTTNWNV VINIKNDLDE PLLLTWNGIQ HRKNSWQDGV
101: LGTNCPIPAG WNWTYEFQVK DQIGSFFYFA SLNFQRASGG YGGIVINNRN VIPVPFGTPD GDITIFIGDW YTKSHKELRK DVENGIDLGV PDAILFNGLG
201: PYRYDQALVP DGIGYHTINV EPGKTYRLRV HNVGIATSLN FRIQNHNLLL VETEGSYTVQ QNYTNMDIHV GQSYSFLVTM DQNASSDYYM VASPRFVNSS
301: AWAKATGVAI LHYSNSQGPA SGPLPDPPND LDTFFSMNQA RSIRWNVSAG AARPNPQGSF RYGQITVTDV YVLLNRPAEL IDGKYRTTLN GISYLAPSTP
401: LKLAQQFNIP GIYKIDFPNR LMNRPPKVDT SIINGTYRGF MEIIFQNNDT TVQSYHLDGY AFFVVGMDYG VWTENSRGTY NKWDGVARCT TQVFPGAWTA
501: ILVSLDNVGI WNLRTENLNT WYLGQEVYVN VVNPEITDKT ELPLPDNAIY CGVLSSLQKD RSQRVRFSGA PPLTITRRTI LFALITALIT AFISS

Best Arabidopsis Sequence Match ( AT5G48450.1 )
(BLAST)

001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VNINRLCNTK KILDSTAKAQ
601: TDLSLVETDR ISEKNRDRIS Y

Arabidopsis Description

sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.