Factsheet for VIT_02s0154g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04081	Soybean	extracellular	81.22	81.08
KRH57349	Soybean	endoplasmic reticulum	80.88	80.07
Solyc08g079090.2.1	Tomato	extracellular	78.17	78.44
Bra018479.1-P	Field mustard	plasma membrane	77.67	78.33
CDX97339	Canola	plasma membrane	77.67	78.33
CDY04429	Canola	plasma membrane	77.5	78.16
Bra000773.1-P	Field mustard	extracellular	76.82	77.61
CDX90830	Canola	extracellular	76.82	77.61
PGSC0003DMT400012216	Potato	extracellular, plasma membrane, vacuole	78.34	77.42
AT4G12420.2	Thale cress	extracellular, plasma membrane	76.65	77.17
VIT_16s0022g00680.t01	Wine grape	plasma membrane	72.93	72.8
VIT_07s0141g00540.t01	Wine grape	extracellular	68.87	68.4
VIT_12s0059g00770.t01	Wine grape	extracellular	48.05	52.5
VIT_18s0001g00470.t01	Wine grape	extracellular	46.7	51.02
VIT_03s0038g03570.t01	Wine grape	extracellular	45.85	50.0
VIT_10s0116g01610.t01	Wine grape	extracellular	45.69	50.0
VIT_00s1643g00010.t01	Wine grape	vacuole	46.36	49.82
VIT_00s1309g00010.t01	Wine grape	vacuole	46.36	49.82
VIT_00s0253g00040.t01	Wine grape	extracellular	44.16	48.69
VIT_10s0116g01600.t01	Wine grape	extracellular, mitochondrion	9.98	47.97
VIT_13s0019g05180.t01	Wine grape	cytosol	41.12	46.29
VIT_00s0253g00050.t01	Wine grape	extracellular, mitochondrion	43.99	43.26

Protein Annotations

EntrezGene:100262548	wikigene:100262548	Gene3D:2.60.40.420	MapMan:50.1.10	ProteinID:CBI31884	ProteinID:CBI31884.3
InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin	UniProt:D7TN11	EMBL:FN596001
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0009653
GO:GO:0009932	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016491
GO:GO:0016722	GO:GO:0030312	GO:GO:0040007	GO:GO:0046658	GO:GO:0048046	GO:GO:0055114
InterPro:IPR008972	EntrezGene:LOC100262548	wikigene:LOC100262548	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF82	SUPFAM:SSF49503	SignalP:SignalP-noTM	TIGR:TC56579	TIGR:TC64136
UniParc:UPI00015CC926	ArrayExpress:VIT_02s0154g00080	EnsemblPlantsGene:VIT_02s0154g00080	EnsemblPlants:VIT_02s0154g00080.t01	unigene:Vvi.9348	RefSeq:XP_002266352
RefSeq:XP_002266352.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:-:4870560..4875244

Molecular Weight (calculated)

65841.3 Da

IEP (calculated)

8.966

GRAVY (calculated)

-0.234

Length

591 amino acids

Sequence
(BLAST)

001: MASSGFLGLS LIHIALLLSF CFAEDPFVHF DFEVSYITAS PLGVPQQVIA INGKFPGPVV NATTNNNVVV NVRNKLDENL LITWSGIQQR RSSWQDGVPG
101: TNCPIPPKWN WTYQFQVKDQ IGSFFYFPSL NFQRAAGGYG GFIINNRAII PIPFATPDGD ITIMIGDWYT KNHTDLRKTL NGGKELGMPN GVLINGKGPY
201: RYNTTLVPEG IDYETIDVQP GKTYRIRVHN VGVSTSLNFR IQNHNLLLAE TEGSYTVQQN YTSLDIHVGQ SYSFLVTMDQ NASTDYYIVA SARFVNESLW
301: KRVTGVAILR YSNSKGKASG PLPDPPNDEF DKTFSMNQAR SIRWNVSASG ARPNPQGSFR YGSINVTDVY VLKNKPPVTI DGKMRTTLSG ISFVNPTTPI
401: RLADQFKVKG VYKLDFPKTP LTGSPRMETS VINGTYRGFM EVILQNNDTK MQSYHMNGYA FFVVGMDYGE WTENSRGTYN KWDGIARSTT QVFPGAWTAI
501: LISLDNVGVW NLRAENLDSW HLGQETYVRV VNPEATNKTE LPMPDNALFC GALSKMQKPQ DITSSTTSIS GSKLSIFFTL LMIYAAISTF H

Best Arabidopsis Sequence Match ( AT4G12420.1 )
(BLAST)

001: MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC
101: PIPPKWNWTY EFQVKDQIGS FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG KDLGMPDGVL INGKGPYRYN
201: DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV
301: TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA
401: DKLKVKDVYK LDFPKRPLTG PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD GIARSTIQVY PGAWSAILIS
501: LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH

Arabidopsis Description

SKU5Monocopper oxidase-like protein SKU5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU40]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.