Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g080700.1.1 | Tomato | cytosol | 66.67 | 82.83 |
| GSMUA_Achr5P26550_001 | Banana | cytosol | 76.42 | 72.31 |
| VIT_10s0116g01610.t01 | Wine grape | extracellular | 92.68 | 21.11 |
| Os07t0510900-01 | Rice | extracellular, peroxisome | 74.8 | 19.83 |
| VIT_12s0059g00770.t01 | Wine grape | extracellular | 82.93 | 18.85 |
| Os06t0678800-01 | Rice | extracellular | 79.67 | 18.08 |
| EER90222 | Sorghum | extracellular | 79.67 | 17.95 |
| TraesCS7B01G359700.1 | Wheat | extracellular | 78.86 | 17.9 |
| TraesCS7D01G447200.1 | Wheat | extracellular | 78.86 | 17.9 |
| Zm00001d014366_P002 | Maize | extracellular | 79.67 | 17.88 |
| TraesCS7A01G459400.1 | Wheat | extracellular | 78.86 | 17.83 |
| HORVU7Hr1G105620.1 | Barley | extracellular | 78.05 | 17.71 |
| VIT_18s0001g00470.t01 | Wine grape | extracellular | 76.42 | 17.38 |
| TraesCS2B01G274800.1 | Wheat | vacuole | 74.8 | 16.88 |
| TraesCS2D01G230800.1 | Wheat | extracellular | 74.8 | 16.88 |
| EER97278 | Sorghum | extracellular, golgi | 74.8 | 16.79 |
| TraesCS2A01G224600.1 | Wheat | extracellular | 73.98 | 16.7 |
| HORVU2Hr1G047260.1 | Barley | extracellular, golgi, vacuole | 74.8 | 16.7 |
| Zm00001d021599_P002 | Maize | extracellular, plasma membrane, vacuole | 74.8 | 16.49 |
| VIT_03s0038g03570.t01 | Wine grape | extracellular | 72.36 | 16.42 |
| VIT_00s0253g00040.t01 | Wine grape | extracellular | 59.35 | 13.62 |
| VIT_00s1309g00010.t01 | Wine grape | vacuole | 52.85 | 11.82 |
| VIT_00s1643g00010.t01 | Wine grape | vacuole | 52.85 | 11.82 |
| VIT_13s0019g05180.t01 | Wine grape | cytosol | 47.15 | 11.05 |
| VIT_00s0253g00050.t01 | Wine grape | extracellular, mitochondrion | 52.85 | 10.82 |
| VIT_07s0141g00540.t01 | Wine grape | extracellular | 52.03 | 10.76 |
| VIT_02s0154g00080.t01 | Wine grape | extracellular | 47.97 | 9.98 |
| VIT_16s0022g00680.t01 | Wine grape | plasma membrane | 47.97 | 9.97 |
| GSMUA_Achr5P26560_001 | Banana | extracellular | 5.69 | 2.02 |
| Os07t0510833-00 | Rice | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.1 | ProteinID:CBI23229 | ProteinID:CBI23229.3 | InterPro:Cu-oxidase_2 | InterPro:Cupredoxin |
| UniProt:E0CVR8 | EMBL:FN595248 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 |
| GO:GO:0009506 | GO:GO:0016491 | GO:GO:0016722 | GO:GO:0030312 | GO:GO:0055114 | InterPro:IPR008972 |
| PFAM:PF07731 | PANTHER:PTHR11709 | PANTHER:PTHR11709:SF11 | SUPFAM:SSF49503 | UniParc:UPI0001BE221A | ArrayExpress:VIT_10s0116g01600 |
| EnsemblPlantsGene:VIT_10s0116g01600 | EnsemblPlants:VIT_10s0116g01600.t01 | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:863019..866097
Molecular Weight (calculated)
14256.2 Da
IEP (calculated)
10.077
GRAVY (calculated)
-0.300
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLIDLRYLG KSLKSWHIDG YSFFVMGMDG GQWTPASRAS YNLRDTVARC TVQVYPKAWT AIYMALDNVG MWNVRSENWA RQYLGQQFYL RVFSPANSWR
101: DELPIPKNAL LCGRASGRHT RPL
101: DELPIPKNAL LCGRASGRHT RPL
001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F
Arabidopsis Description
sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.