Factsheet for HORVU2Hr1G047260.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G230800.1	Wheat	extracellular	95.46	96.51
TraesCS2A01G224600.1	Wheat	extracellular	95.28	96.33
TraesCS2B01G274800.1	Wheat	vacuole	94.74	95.78
EER97278	Sorghum	extracellular, golgi	86.57	87.04
Zm00001d021599_P002	Maize	extracellular, plasma membrane, vacuole	84.75	83.69
VIT_10s0116g01600.t01	Wine grape	extracellular, mitochondrion	16.7	74.8
VIT_12s0059g00770.t01	Wine grape	extracellular	72.41	73.75
HORVU7Hr1G105620.1	Barley	extracellular	71.87	73.06
VIT_10s0116g01610.t01	Wine grape	extracellular	71.32	72.78
Solyc07g052240.2.1	Tomato	nucleus	70.42	71.45
KRH26769	Soybean	endoplasmic reticulum	68.97	70.9
PGSC0003DMT400074510	Potato	extracellular	69.51	70.79
CDX79120	Canola	extracellular	68.6	69.87
KRH25361	Soybean	mitochondrion, nucleus	68.06	69.83
CDX82897	Canola	extracellular	68.42	69.69
KRH56153	Soybean	mitochondrion, nucleus	67.88	69.65
Bra013582.1-P	Field mustard	extracellular	68.24	69.5
Solyc02g080670.2.1	Tomato	nucleus	68.97	69.34
AT4G22010.1	Thale cress	extracellular	67.88	69.13
PGSC0003DMT400042483	Potato	extracellular	68.6	69.1
Solyc07g052230.2.1	Tomato	extracellular	67.33	69.09
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	60.07	68.96
KRH51114	Soybean	endoplasmic reticulum	68.24	68.74
KRH02049	Soybean	nucleus	67.88	68.12
Solyc02g080700.1.1	Tomato	cytosol	12.16	67.68
KRH11453	Soybean	extracellular	50.45	60.96
Os07t0510833-00	Rice	extracellular	10.89	60.0
HORVU2Hr1G062590.3	Barley	extracellular	55.35	56.48
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	6.17	53.97
HORVU2Hr1G096250.3	Barley	extracellular	30.13	53.21
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	51.18	50.63
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	51.0	50.18
HORVU3Hr1G033220.2	Barley	extracellular	49.0	48.39
HORVU7Hr1G000150.1	Barley	extracellular	50.27	46.48
HORVU1Hr1G046690.8	Barley	extracellular, plasma membrane	49.91	44.86
HORVU7Hr1G071750.4	Barley	extracellular, vacuole	47.55	39.16
HORVU3Hr1G015510.2	Barley	cytosol	24.5	37.82
CDX76855	Canola	cytoskeleton, cytosol, extracellular	15.97	35.34

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	UniProt:A0A287HXL3	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G047260	EnsemblPlants:HORVU2Hr1G047260.1
InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF106
SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B468FD9	SEG:seg	:

Description

No Description!

Coordinates

chrchr2H:-:257826080..257831299

Molecular Weight (calculated)

60832.5 Da

IEP (calculated)

9.767

GRAVY (calculated)

-0.152

Length

551 amino acids

Sequence
(BLAST)

001: MGAVRKMAMG GSAVALLSFL IGLPLLSVLV AGEDPYRFFT WNVSYGDIYP LGVKQQGILI NGQFPGPQID AVTNDNLVVN VFNKLNEPFL LSWSGVQQRR
101: NSFEDGVAGT TCPIPAGANF TYILQVKDQI GTYFYFPSLA FHKAAGGFGA IRVLSRPRIP VPFPPPAADY TALIGDWYKA NHTDLRYMLD SGKALGFPDG
201: LLINGRGWNG YTFTVRPGMT YRFRITNVGL ATSLNIRFQG HTMKLVEVEG SHTMQTSYSS LDVHLGQSYS VLLTADQPAL DYAIVVSTRF TTKIISTTAV
301: LHYANSAGKA PGPLPGGPTT QIDWSLNQAR SIRWNLTASG PRPNPQGSYH YGQVPTTRTI RLANSAATIN GKQRYAVNGV SHVNADTPLK IADYYKIPGV
401: FSVGTISDSP TYGGAYLRTS VMGADYRGYV EIVFENSENE VQSWHIDGYA FWVVGMNGGK WSPASRQIYN LRDGVSRYTV QVYPNAWTAI YMPLDNVGIW
501: NVRSETWARQ YLGQQFYLRV WTPSTSWRDE FPIPKNALLC GRAAGRRTRP L

Best Arabidopsis Sequence Match ( AT1G76160.1 )
(BLAST)

001: MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG
101: TTCPIPPGKN YTYILQMKDQ IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL DNGKKLPLPD GILINGRSSG
201: ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP
401: TGGGIYLDTS VMQVDYRTFV EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI LIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP L

Arabidopsis Description

sks5Sks5 [Source:UniProtKB/TrEMBL;Acc:A0A178WJJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.