Factsheet for HORVU2Hr1G062590.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G259100.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	96.48	95.77
TraesCS2B01G277200.1	Wheat	extracellular	96.85	95.61
TraesCS2A01G264900.1	Wheat	extracellular	95.74	95.04
Os07t0119400-01	Rice	extracellular	86.3	85.5
OQU88350	Sorghum	extracellular	79.44	77.58
Zm00001d018696_P001	Maize	extracellular	78.33	72.68
GSMUA_Achr6P34670_001	Banana	extracellular	67.96	68.98
GSMUA_Achr10P...	Banana	extracellular	68.15	67.15
KRH57764	Soybean	cytosol, extracellular, plastid	51.67	65.65
KRH28523	Soybean	extracellular	64.26	64.62
KRH76937	Soybean	endoplasmic reticulum	64.44	64.44
VIT_00s0253g00040.t01	Wine grape	extracellular	63.89	64.37
KRH04707	Soybean	endoplasmic reticulum	64.26	64.14
Solyc02g065170.2.1	Tomato	nucleus	63.7	63.82
Solyc02g090360.2.1	Tomato	extracellular	63.33	63.57
PGSC0003DMT400002004	Potato	extracellular	63.33	63.45
CDY68812	Canola	cytosol, peroxisome	50.19	60.76
CDY18626	Canola	extracellular	60.37	60.26
Bra037137.1-P	Field mustard	extracellular	60.19	60.07
CDX81353	Canola	extracellular	60.0	59.89
PGSC0003DMT400025973	Potato	extracellular	62.96	59.75
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	59.81	59.27
CDY43557	Canola	extracellular	59.26	59.15
Bra036800.1-P	Field mustard	extracellular	59.26	59.15
AT5G66920.1	Thale cress	extracellular, plasma membrane, vacuole	59.63	58.97
CDY01453	Canola	extracellular, golgi	59.44	58.9
CDY12788	Canola	extracellular	58.89	58.56
HORVU7Hr1G105620.1	Barley	extracellular	57.96	57.75
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	6.48	55.56
HORVU2Hr1G047260.1	Barley	extracellular, golgi, vacuole	56.48	55.35
HORVU2Hr1G096250.3	Barley	extracellular	29.26	50.64
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	48.89	47.14
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	48.52	47.04
HORVU3Hr1G033220.2	Barley	extracellular	48.52	46.95
HORVU1Hr1G046690.8	Barley	extracellular, plasma membrane	50.0	44.05
HORVU7Hr1G000150.1	Barley	extracellular	46.11	41.78
HORVU7Hr1G071750.4	Barley	extracellular, vacuole	47.22	38.12
HORVU3Hr1G015510.2	Barley	cytosol	25.0	37.82

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009628
GO:GO:0016491	GO:GO:0030312	GO:GO:0055114	GO:GO:0080167	EnsemblPlantsGene:HORVU2Hr1G062590	EnsemblPlants:HORVU2Hr1G062590.3
InterPro:IPR008972	UniProt:M0XEA3	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF26	SUPFAM:SSF49503	SignalP:SignalP-noTM	UniParc:UPI000296A8FD	SEG:seg	:

Description

No Description!

Coordinates

chrchr2H:+:420775077..420778081

Molecular Weight (calculated)

59512.4 Da

IEP (calculated)

5.956

GRAVY (calculated)

-0.208

Length

540 amino acids

Sequence
(BLAST)

001: MPPRPSLPLA FLLLLAARLA GADDPYRYFT WIVTYGPINP LGTTQQGILI NGQFPGPRID CVTNDNLIVN VVNNLDEPFL ITWNGIKQRK NSWQDGVAGT
101: NCPIPPGANY TYKFQAKDQI GTFTYFPSVA LHRAAGGFGA LNVYQRPSIP VPYPLPAGDF TLLVGDWYLA GHDQLRQTLD SGAPLPFPDA LLINGMPSAT
201: LVGDQGRTYL LRVSNVGMKT SINFRIQGHS LRLAEVEGTH PVQNVYDSLD VHVGQSVAFL VTLDQPPMDY AVVASTRFNP ADTTPLTAVG TLHYSSATSM
301: APGPLPAGPP EEIEWSMNQA RSFRWNLTAS AARPNPQGSF HYGTIQTSRT LVLASSAPVV AGQRRYAVNG VSFVVPDTPL KLLDNYNIAN MIEWDSVPER
401: PDGGAPRPGT PVVRLNLHEF VEVVFQNTEN EMQSWHLDGY DFWVVGYGNG GQWTENERLN YNLVDAQARH TVQVYPNGWS AILVSLDNQG MWNLRSANWD
501: RQYLGQQLYL RVWTAEQSFS NEYSIPTNAI LCGRAAGLPH

Best Arabidopsis Sequence Match ( AT5G66920.1 )
(BLAST)

001: MKMASRKTTS LLNHLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK
101: NSWQDGVLGT NCPIQPNSNF TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPLPTADF TLLVGDWFKT NHKTLQQRLD SGGVLPFPDG
201: MLINGQTQST FSGDQGKTYM LRISNVGLSS TFNFRIQGHT MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YIVASTRFIR SKLSVMGLLR
301: YSNSRVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG MISPTKTFVF SNSAPLINGK QRYAVNGVSY VKSETPLKLA DHFGISGVFS
401: TNAIQSVPSN SPPTVATSVV QTSHHDFLEI VFQNNEKSMQ SWHLDGYDFW VVGFGSGQWT PAKRSLHNLV DALTRHTTQV YPESWTTILV SLDNQGMWNM
501: RSAIWERQYS GQQFYLKVWN SVQSLANEYN PPDNLQLCGK AVGRHV

Arabidopsis Description

sks17Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.