Factsheet for Zm00001d018696_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88350	Sorghum	extracellular	84.71	89.15
Os07t0119400-01	Rice	extracellular	74.74	79.82
TraesCS2D01G259100.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	73.37	78.49
HORVU2Hr1G062590.3	Barley	extracellular	72.68	78.33
TraesCS2B01G277200.1	Wheat	extracellular	73.2	77.88
TraesCS2A01G264900.1	Wheat	extracellular	72.51	77.57
GSMUA_Achr6P34670_001	Banana	extracellular	60.82	66.54
GSMUA_Achr10P...	Banana	extracellular	61.0	64.78
Solyc02g065170.2.1	Tomato	nucleus	57.9	62.52
PGSC0003DMT400002004	Potato	extracellular	57.56	62.15
Solyc02g090360.2.1	Tomato	extracellular	57.22	61.9
KRH76937	Soybean	endoplasmic reticulum	57.39	61.85
KRH28523	Soybean	extracellular	56.7	61.45
KRH04707	Soybean	endoplasmic reticulum	56.87	61.18
KRH57764	Soybean	cytosol, extracellular, plastid	44.67	61.18
VIT_00s0253g00040.t01	Wine grape	extracellular	55.84	60.63
CDY18626	Canola	extracellular	54.98	59.15
Bra037137.1-P	Field mustard	extracellular	54.81	58.96
CDX81353	Canola	extracellular	54.64	58.78
PGSC0003DMT400025973	Potato	extracellular	57.04	58.35
CDY68812	Canola	cytosol, peroxisome	44.16	57.62
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	53.95	57.61
CDY01453	Canola	extracellular, golgi	53.61	57.25
CDY12788	Canola	extracellular	53.26	57.09
Bra036800.1-P	Field mustard	extracellular	52.92	56.93
CDY43557	Canola	extracellular	52.92	56.93
AT5G66920.1	Thale cress	extracellular, plasma membrane, vacuole	53.26	56.78
Zm00001d014366_P002	Maize	extracellular	52.41	55.66
Zm00001d021599_P002	Maize	extracellular, plasma membrane, vacuole	53.09	55.38
Zm00001d026132_P001	Maize	vacuole	52.75	53.39
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	44.85	46.69
Zm00001d012524_P001	Maize	vacuole	44.67	46.51
Zm00001d043090_P001	Maize	vacuole	44.33	46.32
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	45.19	46.14
Zm00001d032504_P001	Maize	plasma membrane	44.67	42.9
Zm00001d024595_P001	Maize	extracellular	43.64	42.47
Zm00001d024594_P001	Maize	extracellular, plasma membrane	43.64	42.19
Zm00001d045599_P001	Maize	plasma membrane	42.78	42.06
Zm00001d029193_P001	Maize	mitochondrion	45.88	38.64
Zm00001d047156_P002	Maize	cytosol	12.54	36.14
Zm00001d037444_P001	Maize	mitochondrion	14.43	31.34
Zm00001d004806_P001	Maize	plastid	3.26	22.35

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	UniProt:A0A1D6HRM7	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009628
GO:GO:0016491	GO:GO:0030312	GO:GO:0055114	GO:GO:0080167	InterPro:IPR008972	ProteinID:ONM51139.1
PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF26	SUPFAM:SSF49503
SignalP:SignalP-noTM	UniParc:UPI000221CFBB	EnsemblPlantsGene:Zm00001d018696	EnsemblPlants:Zm00001d018696_P001	EnsemblPlants:Zm00001d018696_T001	SEG:seg

Description

SKU5 similar 17

Coordinates

chr7:-:2698898..2701382

Molecular Weight (calculated)

62432.9 Da

IEP (calculated)

6.703

GRAVY (calculated)

-0.015

Length

582 amino acids

Sequence
(BLAST)

001: MAAPPPAPFL LLLAVAAASL AGADDPYRYF TWTVTYGPIS PLGTTQQFFS SSPLPVPQLL HALHLSQFFP PSSPLPVPQL RQGILINGQF PGPRIDCVTN
101: DNLVVNVVNS LDEPFLLTWN GVKQRKNSWQ DGVAGTNCGI PPGANYTYRF QAKDQIGTFF YFPSLALHRA AGGFGALNVY QRPAIPVPYP PPAGDFTLLV
201: GDWYAAASPH ADLRRALDDG GGGALPPPAA LLINGAAASG AAPFVGAQGG TYLFRVSNIG LRASVNVRVQ GHALRLVEVE GTHPVQSAYD SLDVHAGQSL
301: AFLVTLDQAP LDYAVVASTR FAAAELTAVA TLHYAGATAR APGPLPPAPP PGYGWSLGQA RSFRWNLTAS AARPNPQGSF HYGAIPTSRT LVLASSASLD
401: GAGRRRCAVN AVSFVVPDTP LKLADRYDIA GVIDWDGLPA RLDGAAAVPR AGTPVLRLGL HEFVEVVFQN TEEELQSWHL DGYDFWVVGY GDGQWNETQR
501: QTYNLVDAQA RHTVQVYPNG WSAILVSLDN QGMWNLRSAM WDRQYLGQQL YLRVWTPEQS LSNEYAIPAN AILCGKAAAL PH

Best Arabidopsis Sequence Match ( AT5G66920.1 )
(BLAST)

001: MKMASRKTTS LLNHLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK
101: NSWQDGVLGT NCPIQPNSNF TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPLPTADF TLLVGDWFKT NHKTLQQRLD SGGVLPFPDG
201: MLINGQTQST FSGDQGKTYM LRISNVGLSS TFNFRIQGHT MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YIVASTRFIR SKLSVMGLLR
301: YSNSRVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG MISPTKTFVF SNSAPLINGK QRYAVNGVSY VKSETPLKLA DHFGISGVFS
401: TNAIQSVPSN SPPTVATSVV QTSHHDFLEI VFQNNEKSMQ SWHLDGYDFW VVGFGSGQWT PAKRSLHNLV DALTRHTTQV YPESWTTILV SLDNQGMWNM
501: RSAIWERQYS GQQFYLKVWN SVQSLANEYN PPDNLQLCGK AVGRHV

Arabidopsis Description

sks17Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.