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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68812 Canola cytosol, peroxisome 81.52 98.88
CDY18626 Canola extracellular 90.2 90.2
CDX81353 Canola extracellular 89.65 89.65
AT5G66920.1 Thale cress extracellular, plasma membrane, vacuole 88.35 87.55
CDY01453 Canola extracellular, golgi 87.06 86.42
CDY12788 Canola extracellular 85.4 85.08
VIT_00s0253g00040.t01 Wine grape extracellular 73.2 73.88
KRH57764 Soybean cytosol, extracellular, plastid 56.56 72.0
KRH04707 Soybean endoplasmic reticulum 71.9 71.9
KRH28523 Soybean extracellular 71.35 71.88
KRH76937 Soybean endoplasmic reticulum 71.16 71.3
Solyc02g090360.2.1 Tomato extracellular 70.06 70.45
Solyc02g065170.2.1 Tomato nucleus 69.69 69.94
PGSC0003DMT400002004 Potato extracellular 69.32 69.57
CDY68876 Canola cytosol 13.86 66.96
PGSC0003DMT400025973 Potato extracellular 70.24 66.78
GSMUA_Achr6P34670_001 Banana extracellular 64.51 65.6
GSMUA_Achr10P... Banana extracellular 64.14 63.32
HORVU2Hr1G062590.3 Barley extracellular 59.15 59.26
Os07t0119400-01 Rice extracellular 59.52 59.08
CDX72617 Canola extracellular 58.96 58.96
CDY42716 Canola extracellular 58.78 58.89
TraesCS2D01G259100.1 Wheat endoplasmic reticulum, extracellular, mitochondrion 59.15 58.82
CDX69261 Canola extracellular 57.3 58.82
TraesCS2B01G277200.1 Wheat extracellular 59.15 58.5
TraesCS2A01G264900.1 Wheat extracellular 58.78 58.46
CDY38959 Canola extracellular 57.86 58.07
CDX82897 Canola extracellular 57.86 57.86
CDX79120 Canola extracellular 57.86 57.86
CDX75611 Canola extracellular 57.67 57.67
CDX87633 Canola extracellular 56.19 56.19
CDX73238 Canola extracellular 56.01 56.01
OQU88350 Sorghum extracellular 57.12 55.88
CDY67479 Canola extracellular 54.9 54.9
CDY55201 Canola extracellular 55.64 54.83
CDY35790 Canola extracellular 54.9 54.8
CDX89586 Canola mitochondrion 22.37 54.5
CDY68834 Canola extracellular, vacuole 55.27 54.46
CDY68850 Canola extracellular 30.5 54.46
CDY31468 Canola extracellular 54.16 53.18
CDY50029 Canola extracellular 53.05 53.15
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 53.79 53.01
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 53.79 53.01
Zm00001d018696_P001 Maize extracellular 56.93 52.92
CDX75708 Canola extracellular 53.6 52.63
CDY43352 Canola extracellular, plasma membrane 49.35 52.46
CDX82540 Canola extracellular 53.42 52.45
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 53.42 52.36
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 53.42 52.36
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 53.05 52.18
CDX82541 Canola extracellular, plasma membrane 53.42 52.07
CDY49392 Canola extracellular 42.88 52.02
CDY43353 Canola extracellular, plasma membrane, vacuole 53.05 51.81
CDY24189 Canola extracellular, plasma membrane, vacuole 53.05 51.81
CDY23596 Canola extracellular, plasma membrane 53.05 51.71
CDX97352 Canola mitochondrion 46.58 51.64
CDX75707 Canola extracellular, plasma membrane, vacuole 52.87 51.53
CDY43995 Canola extracellular, plasma membrane 52.87 51.53
CDY54363 Canola extracellular 51.2 50.83
CDX89588 Canola cytosol 25.14 49.45
CDX91548 Canola cytosol 44.73 48.69
CDY64276 Canola cytosol 54.71 48.21
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 54.9 46.48
CDY13534 Canola extracellular 45.66 45.32
CDY39058 Canola extracellular 45.47 45.14
CDY48757 Canola extracellular, plasma membrane, vacuole 49.17 44.71
CDY05676 Canola extracellular, plasma membrane, vacuole 49.17 44.63
CDX97339 Canola plasma membrane 47.13 43.52
CDY29530 Canola plastid 48.61 43.4
CDY04429 Canola plasma membrane 46.95 43.34
CDY32795 Canola cytosol 8.32 43.27
CDY16369 Canola mitochondrion 37.89 43.25
CDX90830 Canola extracellular 46.77 43.25
CDY38866 Canola extracellular 46.21 42.73
CDY64023 Canola extracellular 46.21 42.73
CDY46940 Canola plasma membrane 46.4 42.04
CDX91586 Canola extracellular 45.84 41.54
CDY48940 Canola extracellular 5.91 41.03
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 45.29 40.9
CDX89433 Canola plasma membrane 44.73 40.47
CDX99917 Canola plasma membrane 44.55 40.37
CDY00478 Canola cytosol 25.88 36.27
CDX76855 Canola cytoskeleton, cytosol, extracellular 14.05 30.52
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078I0E6UniProt:A0A078I0E6EnsemblPlants:CDY43557ProteinID:CDY43557
ProteinID:CDY43557.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00076849001InterPro:IPR008972PFAM:PF00394PFAM:PF07731
PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF26SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EF1E7ESEG:seg::::
Description
BnaC02g16540DBnaC02g16540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0E6]
Coordinates
chrLK032561:+:16885..19621
Molecular Weight (calculated)
60653.7 Da
IEP (calculated)
10.254
GRAVY (calculated)
-0.235
Length
541 amino acids
Sequence
(BLAST)
001: MARGKATSLL HILLLGSLLI SLVSVKGESP YKFYTWTVTY GIISPLGVPQ QVILINGQFP GPKLEVVTND NIILNLINKL DQPFLLTWNG IKQRKNSWQD
101: GVLGTNCPIP PNSNFTYKFQ TKDQIGTYNY FPSTAFHKAA GGFGAINVYA RPRIPIPYLL PVSDFTLLIG DWFKTNHKTL QQRLDSGGVL PFPDGMLING
201: QTQTSFTGDQ GKTYMLRISN VGLSSTFNFR IQGHKMKVVE VEGSHVIQND YESLDVHVGQ SLSLLVTLNQ PPKDYYIVAS TRFLRRKLNV TGLLRYSNSR
301: VPASGAPPPL PPGELIWSMR QARTFRWNLT ANAARPNPQG SFHYGKIKPT KSFVFSNSAP LINGKQRYAV NGVSYVNSET PVKLADHFNI AGVFSTNAIQ
401: SFPSNSRVTV ATSVVQASLH DFLEIVFQNN EKSVQSWHLD GYDFWVVGFG SGQWTPAKRR LYNLADALTR HTTQVYPNAW TTILVSLDNQ GMWSMRSARW
501: DRQYLGQQFY LKVWDPVKSL ANEYNPPDNL LRCGKAVGRH L
Best Arabidopsis Sequence Match ( AT5G66920.1 )
(BLAST)
001: MKMASRKTTS LLNHLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK
101: NSWQDGVLGT NCPIQPNSNF TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPLPTADF TLLVGDWFKT NHKTLQQRLD SGGVLPFPDG
201: MLINGQTQST FSGDQGKTYM LRISNVGLSS TFNFRIQGHT MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YIVASTRFIR SKLSVMGLLR
301: YSNSRVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG MISPTKTFVF SNSAPLINGK QRYAVNGVSY VKSETPLKLA DHFGISGVFS
401: TNAIQSVPSN SPPTVATSVV QTSHHDFLEI VFQNNEKSMQ SWHLDGYDFW VVGFGSGQWT PAKRSLHNLV DALTRHTTQV YPESWTTILV SLDNQGMWNM
501: RSAIWERQYS GQQFYLKVWN SVQSLANEYN PPDNLQLCGK AVGRHV
Arabidopsis Description
sks17Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.