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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032154.1-P Field mustard extracellular 100.0 100.0
CDX89586 Canola mitochondrion 40.82 99.1
AT2G23630.2 Thale cress extracellular 87.01 85.9
CDX72617 Canola extracellular 78.85 78.56
CDX69261 Canola extracellular 76.81 78.56
CDY42716 Canola extracellular 78.48 78.33
CDX75611 Canola extracellular 78.29 78.0
CDX89588 Canola cytosol 35.44 69.45
KRH04708 Soybean endoplasmic reticulum 65.68 65.07
CDY68876 Canola cytosol 13.17 63.39
KRH57766 Soybean extracellular 21.71 62.23
VIT_00s0253g00050.t01 Wine grape extracellular, mitochondrion 68.46 61.4
CDX81353 Canola extracellular 59.18 58.96
CDY18626 Canola extracellular 58.81 58.6
CDY01453 Canola extracellular, golgi 59.18 58.53
CDY12788 Canola extracellular 58.63 58.2
CDY43557 Canola extracellular 58.07 57.86
CDY68812 Canola cytosol, peroxisome 47.31 57.17
CDX82897 Canola extracellular 54.17 53.97
CDX79120 Canola extracellular 54.17 53.97
CDY68850 Canola extracellular 29.68 52.81
CDX73238 Canola extracellular 52.13 51.94
CDX87633 Canola extracellular 52.13 51.94
CDY67479 Canola extracellular 51.76 51.57
CDY35790 Canola extracellular 51.76 51.48
CDY68834 Canola extracellular, vacuole 51.95 51.0
CDY55201 Canola extracellular 51.76 50.82
CDY43995 Canola extracellular, plasma membrane 52.13 50.63
CDY50029 Canola extracellular 50.65 50.56
CDX82541 Canola extracellular, plasma membrane 51.95 50.45
CDY23596 Canola extracellular, plasma membrane 51.95 50.45
CDX82540 Canola extracellular 51.21 50.09
CDY49392 Canola extracellular 41.37 50.0
CDX75707 Canola extracellular, plasma membrane, vacuole 51.39 49.91
CDY31468 Canola extracellular 51.02 49.91
CDX75708 Canola extracellular 51.02 49.91
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 50.46 49.54
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 50.46 49.54
CDY43352 Canola extracellular, plasma membrane 46.75 49.51
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 50.46 49.45
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 50.46 49.28
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 50.46 49.28
CDY43353 Canola extracellular, plasma membrane, vacuole 50.46 49.1
CDY54363 Canola extracellular 49.54 48.99
CDX97352 Canola mitochondrion 44.16 48.77
CDY24189 Canola extracellular, plasma membrane, vacuole 49.91 48.56
CDX91548 Canola cytosol 41.74 45.27
CDY64276 Canola cytosol 51.21 44.95
CDY04429 Canola plasma membrane 48.42 44.54
CDX97339 Canola plasma membrane 48.42 44.54
CDX90830 Canola extracellular 48.24 44.44
CDY05676 Canola extracellular, plasma membrane, vacuole 47.87 43.29
CDY32795 Canola cytosol 8.35 43.27
CDY48757 Canola extracellular, plasma membrane, vacuole 47.68 43.19
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 51.21 43.19
CDY13534 Canola extracellular 43.6 43.12
CDY39058 Canola extracellular 43.41 42.94
CDY64023 Canola extracellular 45.64 42.05
CDY38866 Canola extracellular 45.64 42.05
CDY46940 Canola plasma membrane 46.38 41.88
CDX99917 Canola plasma membrane 46.38 41.88
CDX91586 Canola extracellular 46.2 41.71
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 46.01 41.4
CDX76855 Canola cytoskeleton, cytosol, extracellular 19.11 41.37
CDX89433 Canola plasma membrane 45.64 41.14
CDY16369 Canola mitochondrion 35.99 40.93
CDY29530 Canola plastid 45.64 40.59
CDY48940 Canola extracellular 5.75 39.74
CDY00478 Canola cytosol 25.05 34.97
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078HNK6UniProt:A0A078HNK6EnsemblPlants:CDY38959ProteinID:CDY38959
ProteinID:CDY38959.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00067012001InterPro:IPR008972PFAM:PF00394PFAM:PF07731
PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF113SUPFAM:SSF49503SignalP:SignalP-noTMUniParc:UPI00025447B6
Description
BnaA04g13800DBnaA04g13800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNK6]
Coordinates
chrLK032435:-:321805..325046
Molecular Weight (calculated)
60928.3 Da
IEP (calculated)
10.073
GRAVY (calculated)
-0.206
Length
539 amino acids
Sequence
(BLAST)
001: MKQGNLLIQV FLLAYCFGSV CVINAEDPYR FFTWTVTYGT RSPLGVPQQV ILINGQFPGP PIEGVTNDNI LVNLINKIDE PLLITWNGIK QRRMSWQDGV
101: LGTSCPIQPN SNWTYHFQLK DQIGTYTYFA STSMHRASGA FGALNVNQRS VIFVPYHKPD GDFTLLVSDW YKMGHKALRK RLDSGRALPL PDGLLINGAS
201: KGLAFTGEHG KFYRFRISNV GISTSINFRI QGHMMTLVEV EGSHTLEEVY ESLDVHVGQS LTVLVTLKAP VKDYFIVAST RFTKPVLTTS AILHYKGSKT
301: RPSRPLPIGP TYHIHWSMKQ ARTIRLNLTA NAARPNPQGA FHYGTIPISQ TLVLANARTK INGKLRYTVN RVSYVNPTTP LKLADWYNIP GVFDFKTIKN
401: IPTPGPSILG TSVLDFALHE YVEFVFQNNE RSIQSWHIDG TNAYVVGYGT GTWNVAMRKR YNYVDAVSRH TFQVYPMSWT SVLASLDNKG MWNVRSQIWS
501: RRYLGQELYV RVWNNERSLY TEAEPPLNAL YCGKAKRPV
Best Arabidopsis Sequence Match ( AT2G23630.1 )
(BLAST)
001: MKQKHLLLLG FLLAYCFSSV FVINAEDPYL FFTWTVTYGT RSPLGVPQQV ILINGQFPGP PIEGVTNNNI VVNVINKLDE PFLITWNGIK QRKMSWQDGV
101: LGTNCPIQPK SSWTYHFQLK DQIGTYAYFA STSMHRASGA FGALNVNQRS VIFVPYPKPD ADFTLLVSDW YKMGHKELQR RLDSSRALPP PDGLLINGAS
201: KGLVFTGQHG KIYRFRISNV GISTSINFRI QGHMMTLVEV EGSHTLQEVY ESLDIHVGQS VTVLVTLKAP VKDYFIVAST RFTKPILTTT GILSYQGSKI
301: RPSHPLPIGP TYHIHWSMKQ ARTIRLNLTA NAARPNPQGS FHYGTIPINR TFVLANGRAM INGKLRYTVN RVSYVNPATP LKLADWFNIP GVFNFKTIMN
401: IPTPGPSILG TSVFDVALHE YVEFVFQNNE GSIQSWHLDG TSAYVVGYGS GTWNMAKRRG YNLVDAVSRH TFQVYPMSWT SILVSLDNKG MWNLRSQIWS
501: RRYLGQELYV RVWNNEKSLY TESEPPVNVL FCGKAKHPRL I
Arabidopsis Description
sks16SKU5 similar 16 [Source:TAIR;Acc:AT2G23630]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.