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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
PProwler:secretory
TargetP:secretory
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55201 Canola extracellular 99.27 99.27
Bra008241.1-P Field mustard extracellular 98.18 98.36
CDX87633 Canola extracellular 91.44 92.79
CDX73238 Canola extracellular 91.26 92.61
AT1G76160.1 Thale cress extracellular 88.34 89.65
KRH60965 Soybean nucleus 83.06 83.36
KRH06000 Soybean endoplasmic reticulum 81.6 82.81
KRH51639 Soybean nucleus 82.15 82.45
CDY67479 Canola extracellular 81.24 82.44
CDY35790 Canola extracellular 81.06 82.1
KRH17495 Soybean nucleus 81.6 81.9
VIT_18s0001g00470.t01 Wine grape extracellular 79.42 80.59
PGSC0003DMT400025805 Potato extracellular 78.14 79.44
Solyc04g082140.2.1 Tomato extracellular 77.78 79.07
Solyc12g094460.1.1 Tomato extracellular 74.5 75.18
PGSC0003DMT400075398 Potato extracellular 73.59 74.26
CDY31468 Canola extracellular 73.04 72.78
Solyc12g094470.1.1 Tomato nucleus 71.22 72.01
PGSC0003DMT400075620 Potato extracellular 70.86 71.64
CDX82897 Canola extracellular 67.4 68.39
CDX79120 Canola extracellular 67.4 68.39
CDY68876 Canola cytosol 12.75 62.5
CDX91548 Canola cytosol 54.46 60.16
CDY64276 Canola cytosol 66.85 59.77
CDY29530 Canola plastid 65.03 58.91
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 67.4 57.9
CDY68850 Canola extracellular 31.69 57.43
CDY68812 Canola cytosol, peroxisome 46.45 57.17
CDY01453 Canola extracellular, golgi 56.65 57.06
CDY18626 Canola extracellular 56.1 56.93
CDX81353 Canola extracellular 55.74 56.56
CDY12788 Canola extracellular 55.37 55.99
CDY43557 Canola extracellular 54.46 55.27
CDX69261 Canola extracellular 52.46 54.65
CDY49392 Canola extracellular 44.08 54.26
CDY16369 Canola mitochondrion 46.63 54.01
CDY43995 Canola extracellular, plasma membrane 54.46 53.87
CDY42716 Canola extracellular 52.82 53.7
CDY23596 Canola extracellular, plasma membrane 54.28 53.69
CDY43353 Canola extracellular, plasma membrane, vacuole 54.1 53.61
CDX72617 Canola extracellular 52.82 53.6
CDY24189 Canola extracellular, plasma membrane, vacuole 53.92 53.43
CDX82540 Canola extracellular 53.55 53.36
CDX75708 Canola extracellular 53.55 53.36
CDX82541 Canola extracellular, plasma membrane 53.92 53.33
CDX75707 Canola extracellular, plasma membrane, vacuole 53.92 53.33
CDX75611 Canola extracellular 52.46 53.23
CDY50029 Canola extracellular 52.28 53.15
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 53.37 53.08
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 53.37 53.08
CDX97352 Canola mitochondrion 47.18 53.07
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 52.82 52.82
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 52.82 52.73
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 52.46 52.46
CDY43352 Canola extracellular, plasma membrane 48.63 52.46
CDY38959 Canola extracellular 51.0 51.95
CDY54363 Canola extracellular 51.0 51.38
CDX89586 Canola mitochondrion 20.04 49.55
KRH57767 Soybean cytosol, peroxisome 32.06 49.16
CDY13534 Canola extracellular 46.27 46.61
CDY39058 Canola extracellular 46.27 46.61
CDY04429 Canola plasma membrane 48.45 45.39
CDX97339 Canola plasma membrane 48.45 45.39
CDX90830 Canola extracellular 48.27 45.3
CDY46940 Canola plasma membrane 49.0 45.06
CDY64023 Canola extracellular 47.91 44.96
CDY38866 Canola extracellular 47.91 44.96
CDX99917 Canola plasma membrane 48.82 44.89
CDX91586 Canola extracellular 48.45 44.56
CDY32795 Canola cytosol 8.38 44.23
CDY48757 Canola extracellular, plasma membrane, vacuole 47.91 44.2
CDY05676 Canola extracellular, plasma membrane, vacuole 47.72 43.96
CDX89433 Canola plasma membrane 46.81 42.98
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 46.45 42.57
CDX89588 Canola cytosol 21.13 42.18
CDY48940 Canola extracellular 5.65 39.74
CDY00478 Canola cytosol 27.5 39.12
CDX76855 Canola cytoskeleton, cytosol, extracellular 16.03 35.34
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078JPX5UniProt:A0A078JPX5EnsemblPlants:CDY68834ProteinID:CDY68834
ProteinID:CDY68834.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CuRO_3_AO-like
InterPro:CupredoxinGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00080400001InterPro:IPR008972PFAM:PF00394
PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF90SUPFAM:SSF49503SignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI0004EE3F39SEG:seg:::
Description
BnaCnng60730DBnaCnng60730D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JPX5]
Coordinates
chrLK038098:-:316..4940
Molecular Weight (calculated)
60963.4 Da
IEP (calculated)
9.534
GRAVY (calculated)
-0.235
Length
549 amino acids
Sequence
(BLAST)
001: LIHRLPPKMA ANASFATALT IVFSILFAVT AEDPYRFFNW NVTYGDIYPL GVRQQGILID GKFPGPDIHS VTNDNLVINI FNNLDEPFLL SWNGVQQRRN
101: SYVDGVYGTT CPIPPGKNYT YMLQVKDQIG SFYYFPSLAF HKAAGGFGGI RILSRPRIPV PFPDPAGDYT VLIGDWYKSN HTDLKAKLDS GRKLPLPDGI
201: LINGRGTGAT LNVEQGKTYR LRISNVGLQH SLNFRIQNHK MKVVEVEGTH TLQTTFSSLD VHVGQSYSVL VTADQPAHDY YVVVSSRFTS TVLTTTGVLR
301: YSGSSGGVSG PIPGGPTIQI DWSLNQARAI RTNLTASGPR PNPQGSYHYG MINTTRTIRL ASSAGQVNGK QRYAVNSVSF KPADTPLKLA DYFKIDGVYR
401: VGSVQSQPTG GGIYLDTSVL QADYRTFVEI VFENPENIVQ TWHLDGYSFW VVGMDGGKWS PDSRNEYNLR DALARCTVQV YPSSWTAIYI ALDNVGMWNL
501: RSEFWARQYL GQQLYLRVYT TSTSLRDEFP IPKNALLCGR ASGRSTRPL
Best Arabidopsis Sequence Match ( AT1G76160.1 )
(BLAST)
001: MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG
101: TTCPIPPGKN YTYILQMKDQ IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL DNGKKLPLPD GILINGRSSG
201: ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP
401: TGGGIYLDTS VMQVDYRTFV EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI LIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP L
Arabidopsis Description
sks5Sks5 [Source:UniProtKB/TrEMBL;Acc:A0A178WJJ9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.