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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75611 Canola extracellular 96.96 94.45
CDX72617 Canola extracellular 93.74 91.31
CDY42716 Canola extracellular 93.17 90.93
AT4G37160.1 Thale cress extracellular 91.84 89.46
CDY38959 Canola extracellular 78.56 76.81
CDX89586 Canola mitochondrion 31.31 74.32
KRH04708 Soybean endoplasmic reticulum 66.79 64.71
CDY68876 Canola cytosol 13.66 64.29
KRH57766 Soybean extracellular 22.77 63.83
CDX89588 Canola cytosol 32.45 62.18
VIT_00s0253g00050.t01 Wine grape extracellular, mitochondrion 70.02 61.4
CDX81353 Canola extracellular 59.58 58.04
CDY18626 Canola extracellular 59.39 57.86
CDY01453 Canola extracellular, golgi 59.58 57.61
CDY12788 Canola extracellular 59.2 57.46
CDY43557 Canola extracellular 58.82 57.3
CDY68812 Canola cytosol, peroxisome 47.25 55.83
CDX87633 Canola extracellular 54.46 53.05
CDX73238 Canola extracellular 54.46 53.05
CDX79120 Canola extracellular 54.46 53.05
CDX82897 Canola extracellular 54.46 53.05
CDY55201 Canola extracellular 54.84 52.64
CDY68850 Canola extracellular 30.17 52.48
CDY68834 Canola extracellular, vacuole 54.65 52.46
CDY67479 Canola extracellular 53.13 51.76
CDY35790 Canola extracellular 53.13 51.66
CDY31468 Canola extracellular 52.37 50.09
CDY50029 Canola extracellular 51.23 50.0
CDX82541 Canola extracellular, plasma membrane 52.18 49.55
CDY43352 Canola extracellular, plasma membrane 47.44 49.12
CDX75707 Canola extracellular, plasma membrane, vacuole 51.61 49.01
CDY43995 Canola extracellular, plasma membrane 51.61 49.01
CDX75708 Canola extracellular 51.23 49.0
CDX82540 Canola extracellular 51.23 49.0
CDY49392 Canola extracellular 41.37 48.88
CDY23596 Canola extracellular, plasma membrane 51.42 48.83
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 50.85 48.82
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 50.85 48.82
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 50.66 48.55
CDY43353 Canola extracellular, plasma membrane, vacuole 50.85 48.38
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 50.66 48.37
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 50.66 48.37
CDY24189 Canola extracellular, plasma membrane, vacuole 50.66 48.19
CDX97352 Canola mitochondrion 44.4 47.95
CDY54363 Canola extracellular 49.53 47.89
CDX97339 Canola plasma membrane 49.53 44.54
CDY32795 Canola cytosol 8.73 44.23
CDY13534 Canola extracellular 45.73 44.22
CDY04429 Canola plasma membrane 49.15 44.2
CDX90830 Canola extracellular 48.96 44.1
CDY39058 Canola extracellular 45.54 44.04
CDY48757 Canola extracellular, plasma membrane, vacuole 49.72 44.03
CDY05676 Canola extracellular, plasma membrane, vacuole 49.72 43.96
CDY64276 Canola cytosol 50.47 43.32
CDX91548 Canola cytosol 40.8 43.26
CDY38866 Canola extracellular 46.68 42.05
CDY46940 Canola plasma membrane 47.44 41.88
CDX91586 Canola extracellular 47.44 41.88
CDY64023 Canola extracellular 46.11 41.54
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 50.28 41.47
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 46.87 41.24
CDY48940 Canola extracellular 6.07 41.03
CDX89433 Canola plasma membrane 46.49 40.97
CDX99917 Canola plasma membrane 45.35 40.03
CDY29530 Canola plastid 45.35 39.44
CDY16369 Canola mitochondrion 34.54 38.4
CDX76855 Canola cytoskeleton, cytosol, extracellular 16.89 35.74
CDY00478 Canola cytosol 23.53 32.12
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078BWR8EnsemblPlants:CDX69261ProteinID:CDX69261ProteinID:CDX69261.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CupredoxinGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00131076001InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709
PANTHER:PTHR11709:SF113SUPFAM:SSF49503SignalP:SignalP-noTMUniParc:UPI0004EF31E6SEG:seg:
Description
BnaC01g01920D
Coordinates
chrLK031789:+:3777022..3779262
Molecular Weight (calculated)
59249.0 Da
IEP (calculated)
9.608
GRAVY (calculated)
-0.162
Length
527 amino acids
Sequence
(BLAST)
001: MKPTSLLQCK LFIGSLLFWL GSVLVSAEDP YLFYTWTVTY GTRSPLGVPQ QVILINGQFP GPPIEAVTNN NIVVNLINKL DEPFLITWNG VKQRRTSWQD
101: GVLGTNCPIQ PNSNWTYQFQ LKDQIGTYTY FASTSMHRAS GAFGALNINQ RSVITTPYPT PDGDFTLLVT DWFKMSHKDL RKRLDAGYAL PLPDALLING
201: VSKGLIFTGE QGKTYKFRVS NVGIATSINF RIQDHTMSLI EVEGAHTLQE TYESLDVHVG QSVTVLVTLK ASVRDYYIVA STRFTKPILN TTASLRYLGS
301: KNAVSGPLPV GPTYHIHWSM KQARTIRMNL TANAARPNPQ GSFHYGTIPI NRTLILANAA TMIYGKLRYT VNRISYLNPA TPLKLADCTP TIGPAHFGTS
401: VFDVELHEFV EIVFQNDERS IQSWHMDGTS AFLVGYGSGT WNVTMRKRYN LSDAVARHTF QVYPLSWTSI LVSLDNKGMW NLRSQIWSRR YLGQELYVRV
501: WNDEKSLYTE VDPPLNALYC GQAKRPS
Best Arabidopsis Sequence Match ( AT4G37160.1 )
(BLAST)
001: MKQTNLLVCK LFIGALFWLG SVLVNAEDPY MFYTWTVTYG TRSPLGVPQQ VILINGQFPG PAIEAVTNNN IVVNLINKLD EPFLITWNGV KQRRTSWQDG
101: VLGTNCPIQP NSNWTYQFQL KDQIGTYTYF ASTSLHRASG AFGALNINQR SVITTPYPTP DGDFTLLVSD WFSNMTHKDL RKSLDAGSAL PLPDALLING
201: VSKGLIFTGQ QGKTYKFRVS NVGIATSINF RIQNHTMSLI EVEGAHTLQE SYESLDVHVG QSMTVLVTLK ASVRDYFIVA STRFTKPVLT TTASLRYQGS
301: KNAAYGPLPI GPTYHIHWSM KQARTIRMNL TANAARPNPQ GSFHYGTIPI NRTLVLANAA TLIYGKLRYT VNRISYINPT TPLKLADWYN ISGVFDFKTI
401: ISTPTTGPAH IGTSVIDVEL HEFVEIVFQN DERSIQSWHM DGTSAYAVGY GSGTWNVTMR KRYNLVDAVP RHTFQVYPLS WTTILVSLDN KGMWNLRSQI
501: WSRRYLGQEL YVRVWNDEKS LYTEAEPPLN VLYCGKAKRP L
Arabidopsis Description
sks15Sks15 [Source:UniProtKB/TrEMBL;Acc:A0A178UTS2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.