Factsheet for AT4G37160.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 4
plasma membrane 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69261	Canola	extracellular	89.46	91.84
CDX72617	Canola	extracellular	91.68	91.68
CDY42716	Canola	extracellular	91.5	91.67
Bra017796.1-P	Field mustard	extracellular	91.5	91.67
CDX75611	Canola	extracellular	91.31	91.31
AT2G23630.2	Thale cress	extracellular	78.56	77.84
KRH04708	Soybean	endoplasmic reticulum	67.65	67.28
KRH57766	Soybean	extracellular	22.18	63.83
VIT_00s0253g00050.t01	Wine grape	extracellular, mitochondrion	68.76	61.9
AT5G66920.1	Thale cress	extracellular, plasma membrane, vacuole	59.7	59.16
AT4G22010.1	Thale cress	extracellular	53.05	53.05
AT1G76160.1	Thale cress	extracellular	52.87	52.87
AT1G41830.1	Thale cress	extracellular	52.13	52.03
AT1G21860.1	Thale cress	extracellular	50.65	50.93
AT1G55570.1	Thale cress	extracellular, plasma membrane	51.02	49.73
AT1G21850.1	Thale cress	extracellular	50.65	49.73
AT3G13390.1	Thale cress	extracellular, plasma membrane, vacuole	50.83	49.64
AT3G13400.1	Thale cress	extracellular, plasma membrane	49.54	48.64
AT4G38420.1	Thale cress	extracellular	49.35	48.63
AT1G55560.1	Thale cress	extracellular	48.98	48.27
AT4G28090.1	Thale cress	extracellular	46.77	46.25
AT4G12420.2	Thale cress	extracellular, plasma membrane	49.72	45.83
AT1G75790.1	Thale cress	extracellular	45.29	44.95
AT4G25240.1	Thale cress	plasma membrane	47.32	43.46
AT5G51480.1	Thale cress	extracellular, plasma membrane	47.5	43.41
AT5G48450.1	Thale cress	extracellular	48.24	42.03
Bra011721.1-P	Field mustard	mitochondrion, plastid	87.06	39.71

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EntrezGene:829870	UniProt:A0A178UTS2	ProteinID:AEE86760.1	ArrayExpress:AT4G37160
EnsemblPlantsGene:AT4G37160	RefSeq:AT4G37160	TAIR:AT4G37160	RefSeq:AT4G37160-TAIR-G	EnsemblPlants:AT4G37160.1	TAIR:AT4G37160.1
ProteinID:CAB16759.1	ProteinID:CAB80382.1	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0016491
GO:GO:0016722	GO:GO:0016787	GO:GO:0030312	GO:GO:0030599	GO:GO:0055114	InterPro:IPR008972
RefSeq:NP_195433.1	UniProt:O23170	ProteinID:OAO97319.1	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PO:PO:0009005	PANTHER:PTHR11709	PANTHER:PTHR11709:SF113	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0000048A80	SEG:seg	Symbol:sks15	:	:	:

Description

sks15Sks15 [Source:UniProtKB/TrEMBL;Acc:A0A178UTS2]

Coordinates

chr4:-:17494512..17497276

Molecular Weight (calculated)

60780.8 Da

IEP (calculated)

9.712

GRAVY (calculated)

-0.151

Length

541 amino acids

Sequence
(BLAST)

001: MKQTNLLVCK LFIGALFWLG SVLVNAEDPY MFYTWTVTYG TRSPLGVPQQ VILINGQFPG PAIEAVTNNN IVVNLINKLD EPFLITWNGV KQRRTSWQDG
101: VLGTNCPIQP NSNWTYQFQL KDQIGTYTYF ASTSLHRASG AFGALNINQR SVITTPYPTP DGDFTLLVSD WFSNMTHKDL RKSLDAGSAL PLPDALLING
201: VSKGLIFTGQ QGKTYKFRVS NVGIATSINF RIQNHTMSLI EVEGAHTLQE SYESLDVHVG QSMTVLVTLK ASVRDYFIVA STRFTKPVLT TTASLRYQGS
301: KNAAYGPLPI GPTYHIHWSM KQARTIRMNL TANAARPNPQ GSFHYGTIPI NRTLVLANAA TLIYGKLRYT VNRISYINPT TPLKLADWYN ISGVFDFKTI
401: ISTPTTGPAH IGTSVIDVEL HEFVEIVFQN DERSIQSWHM DGTSAYAVGY GSGTWNVTMR KRYNLVDAVP RHTFQVYPLS WTTILVSLDN KGMWNLRSQI
501: WSRRYLGQEL YVRVWNDEKS LYTEAEPPLN VLYCGKAKRP L

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.