Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G21850.1 | Thale cress | extracellular | 84.01 | 82.03 |
| CDY31468 | Canola | extracellular | 79.0 | 77.13 |
| Bra025818.1-P | Field mustard | extracellular | 78.44 | 76.59 |
| AT1G76160.1 | Thale cress | extracellular | 75.65 | 75.23 |
| KRH06000 | Soybean | endoplasmic reticulum | 72.86 | 72.46 |
| KRH60965 | Soybean | nucleus | 73.05 | 71.85 |
| AT1G41830.1 | Thale cress | extracellular | 71.75 | 71.22 |
| KRH51639 | Soybean | nucleus | 72.3 | 71.12 |
| KRH17495 | Soybean | nucleus | 72.3 | 71.12 |
| PGSC0003DMT400025805 | Potato | extracellular | 70.45 | 70.19 |
| Solyc04g082140.2.1 | Tomato | extracellular | 70.07 | 69.81 |
| VIT_18s0001g00470.t01 | Wine grape | extracellular | 69.89 | 69.5 |
| Solyc12g094460.1.1 | Tomato | extracellular | 68.4 | 67.65 |
| Solyc12g094470.1.1 | Tomato | nucleus | 68.22 | 67.59 |
| PGSC0003DMT400075620 | Potato | extracellular | 68.03 | 67.4 |
| PGSC0003DMT400075398 | Potato | extracellular | 68.03 | 67.28 |
| AT4G22010.1 | Thale cress | extracellular | 65.24 | 64.88 |
| AT4G38420.1 | Thale cress | extracellular | 64.87 | 63.57 |
| CDY29530 | Canola | plastid | 71.19 | 63.2 |
| AT4G28090.1 | Thale cress | extracellular | 57.25 | 56.31 |
| AT3G13390.1 | Thale cress | extracellular, plasma membrane, vacuole | 55.58 | 53.97 |
| AT5G66920.1 | Thale cress | extracellular, plasma membrane, vacuole | 54.65 | 53.85 |
| AT1G55570.1 | Thale cress | extracellular, plasma membrane | 54.65 | 52.97 |
| AT1G55560.1 | Thale cress | extracellular | 52.97 | 51.91 |
| AT3G13400.1 | Thale cress | extracellular, plasma membrane | 53.16 | 51.91 |
| AT2G23630.2 | Thale cress | extracellular | 51.86 | 51.1 |
| AT4G37160.1 | Thale cress | extracellular | 50.93 | 50.65 |
| KRH57767 | Soybean | cytosol, peroxisome | 32.34 | 48.6 |
| AT1G75790.1 | Thale cress | extracellular | 46.84 | 46.24 |
| AT4G12420.2 | Thale cress | extracellular, plasma membrane | 49.26 | 45.14 |
| AT4G25240.1 | Thale cress | plasma membrane | 48.14 | 43.97 |
| AT5G51480.1 | Thale cress | extracellular, plasma membrane | 47.4 | 43.07 |
| AT5G48450.1 | Thale cress | extracellular | 49.26 | 42.67 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | EntrezGene:838788 | ProteinID:AAF16543.1 | ProteinID:AEE30163.1 | ArrayExpress:AT1G21860 |
| EnsemblPlantsGene:AT1G21860 | RefSeq:AT1G21860 | TAIR:AT1G21860 | RefSeq:AT1G21860-TAIR-G | EnsemblPlants:AT1G21860.1 | TAIR:AT1G21860.1 |
| Unigene:At.51712 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 | InterPro:Cu-oxidase_3 | InterPro:CuRO_1_AAO-like | InterPro:Cupredoxin |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 | GO:GO:0009506 | GO:GO:0016491 |
| GO:GO:0016722 | GO:GO:0030312 | GO:GO:0055114 | InterPro:IPR008972 | RefSeq:NP_173604.1 | PFAM:PF00394 |
| PFAM:PF07731 | PFAM:PF07732 | PO:PO:0009047 | PANTHER:PTHR11709 | PANTHER:PTHR11709:SF90 | UniProt:Q9SFF1 |
| SUPFAM:SSF49503 | SignalP:SignalP-noTM | UniParc:UPI00000482A3 | Symbol:sks7 | : | : |
Description
sks7SKU5 similar 7 [Source:UniProtKB/TrEMBL;Acc:Q9SFF1]
Coordinates
chr1:-:7671028..7674215
Molecular Weight (calculated)
60375.2 Da
IEP (calculated)
9.517
GRAVY (calculated)
-0.188
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVKSMNTRA MITTLLFLIS LAFAEDPYRF FEWHVTYGNI SPLGVAQQGI LINGKFPGPD IISITNDNLI INVFNHLDEP FLLSWNGIRN WKNSFQDGVY
101: GTMCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GGIRISSRAL IPVPFPTPAD DYTLLVGDWY KTNHKDLKAQ LDNGGKLPLP DGILINGRSS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHTMKLVEVE GRYTIQNLFS SLDVHVGQSY SVLITADQPA KDYYVVVSSR FTSKILTTTG VLHYSNSVAP
301: VSGPIPDGPI KLSWSFNQAR AIRTNLTASG PRPNPQGSYR YGVINITRTI RLANNLGHIE GKQRYAVNSA SFYPADTPLK LVDYFKIDGV YKPGSISDQP
401: TNGAIFPTTS VMQADFRAFV EVIFENSEDI VQSWHLDGYS FYVVGMELGK WSPASRKVYN LNDAILRCTI QVYPRSWTAI YIALDNVGMW NMRSEIWERQ
501: YLGQQFYMRV YTTSTSLRDE YLIPKNALLC GRASSSHR
101: GTMCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GGIRISSRAL IPVPFPTPAD DYTLLVGDWY KTNHKDLKAQ LDNGGKLPLP DGILINGRSS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHTMKLVEVE GRYTIQNLFS SLDVHVGQSY SVLITADQPA KDYYVVVSSR FTSKILTTTG VLHYSNSVAP
301: VSGPIPDGPI KLSWSFNQAR AIRTNLTASG PRPNPQGSYR YGVINITRTI RLANNLGHIE GKQRYAVNSA SFYPADTPLK LVDYFKIDGV YKPGSISDQP
401: TNGAIFPTTS VMQADFRAFV EVIFENSEDI VQSWHLDGYS FYVVGMELGK WSPASRKVYN LNDAILRCTI QVYPRSWTAI YIALDNVGMW NMRSEIWERQ
501: YLGQQFYMRV YTTSTSLRDE YLIPKNALLC GRASSSHR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.