Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56013 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 95.63 | 95.63 |
| Bra030850.1-P | Field mustard | plasma membrane | 95.63 | 95.63 |
| CDY10549 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 95.45 | 95.45 |
| AT3G13400.1 | Thale cress | extracellular, plasma membrane | 88.71 | 88.38 |
| AT1G55570.1 | Thale cress | extracellular, plasma membrane | 75.96 | 75.14 |
| AT3G13390.1 | Thale cress | extracellular, plasma membrane, vacuole | 74.86 | 74.19 |
| KRH31599 | Soybean | extracellular | 72.5 | 72.1 |
| VIT_00s1643g00010.t01 | Wine grape | vacuole | 70.31 | 70.18 |
| VIT_00s1309g00010.t01 | Wine grape | vacuole | 70.31 | 70.18 |
| GSMUA_Achr11P... | Banana | vacuole | 67.03 | 69.83 |
| GSMUA_Achr5P27810_001 | Banana | extracellular | 66.12 | 68.88 |
| GSMUA_Achr8P01580_001 | Banana | extracellular | 64.3 | 68.41 |
| GSMUA_Achr8P09380_001 | Banana | extracellular | 65.21 | 68.19 |
| GSMUA_Achr9P04930_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 64.85 | 67.94 |
| KRH50514 | Soybean | endoplasmic reticulum, extracellular, vacuole | 67.94 | 67.57 |
| KRH50513 | Soybean | vacuole | 67.58 | 67.45 |
| KRG89471 | Soybean | mitochondrion | 68.31 | 67.33 |
| Solyc11g008860.1.1 | Tomato | extracellular | 66.85 | 66.13 |
| GSMUA_AchrUn_... | Banana | extracellular | 63.39 | 66.03 |
| GSMUA_Achr11P... | Banana | extracellular | 63.39 | 65.78 |
| PGSC0003DMT400041845 | Potato | extracellular, plasma membrane, vacuole | 66.85 | 65.77 |
| Solyc01g056310.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 65.94 | 65.34 |
| HORVU4Hr1G048550.1 | Barley | cytosol, extracellular | 7.47 | 65.08 |
| PGSC0003DMT400016672 | Potato | endoplasmic reticulum | 65.39 | 64.8 |
| PGSC0003DMT400002554 | Potato | endoplasmic reticulum, extracellular, golgi | 65.57 | 64.75 |
| Solyc05g055720.1.1 | Tomato | nucleus | 10.56 | 64.44 |
| Solyc03g063150.2.1 | Tomato | unclear | 65.21 | 64.39 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 65.76 | 64.01 |
| PGSC0003DMT400010905 | Potato | extracellular, plasma membrane | 64.85 | 62.79 |
| GSMUA_Achr9P16870_001 | Banana | extracellular, plasma membrane, vacuole | 63.57 | 62.66 |
| PGSC0003DMT400082031 | Potato | extracellular, plasma membrane, vacuole | 63.57 | 62.66 |
| Solyc01g005510.2.1 | Tomato | extracellular, plasma membrane, vacuole | 63.21 | 62.3 |
| PGSC0003DMT400060352 | Potato | extracellular | 62.11 | 61.78 |
| TraesCS1A01G304100.1 | Wheat | extracellular, golgi, plasma membrane | 61.75 | 60.64 |
| TraesCS1B01G314600.1 | Wheat | plasma membrane | 61.57 | 60.47 |
| TraesCS1D01G303600.1 | Wheat | extracellular | 61.38 | 60.29 |
| HORVU1Hr1G069130.1 | Barley | extracellular, golgi, plasma membrane | 61.38 | 60.18 |
| Solyc05g055710.2.1 | Tomato | extracellular | 49.36 | 59.69 |
| EES01652 | Sorghum | extracellular, golgi, vacuole | 60.66 | 59.68 |
| Os01t0816700-01 | Rice | plasma membrane | 60.11 | 59.67 |
| EES19711 | Sorghum | extracellular | 60.66 | 59.57 |
| Zm00001d043090_P001 | Maize | vacuole | 60.29 | 59.43 |
| Zm00001d012524_P001 | Maize | vacuole | 59.93 | 58.86 |
| Zm00001d038521_P001 | Maize | extracellular, plasma membrane, vacuole | 59.74 | 58.68 |
| HORVU3Hr1G080360.1 | Barley | extracellular, golgi, vacuole | 59.02 | 58.17 |
| GSMUA_Achr3P09610_001 | Banana | plastid | 64.66 | 58.1 |
| Zm00001d010630_P003 | Maize | extracellular, golgi, vacuole | 60.29 | 58.07 |
| TraesCS3A01G340200.1 | Wheat | extracellular, golgi, vacuole | 58.47 | 57.94 |
| TraesCS3D01G333700.1 | Wheat | extracellular, golgi, vacuole | 58.65 | 57.91 |
| TraesCS3B01G371800.1 | Wheat | extracellular, golgi, vacuole | 58.47 | 57.73 |
| GSMUA_Achr5P07530_001 | Banana | extracellular, golgi, vacuole | 63.39 | 55.68 |
| AT1G21860.1 | Thale cress | extracellular | 51.91 | 52.97 |
| AT1G76160.1 | Thale cress | extracellular | 52.09 | 52.87 |
| AT1G41830.1 | Thale cress | extracellular | 52.09 | 52.77 |
| AT5G66920.1 | Thale cress | extracellular, plasma membrane, vacuole | 52.28 | 52.56 |
| AT4G22010.1 | Thale cress | extracellular | 50.27 | 51.02 |
| AT1G21850.1 | Thale cress | extracellular | 51.18 | 51.0 |
| AT4G38420.1 | Thale cress | extracellular | 50.27 | 50.27 |
| AT2G23630.2 | Thale cress | extracellular | 49.91 | 50.18 |
| AT4G37160.1 | Thale cress | extracellular | 48.27 | 48.98 |
| AT4G28090.1 | Thale cress | extracellular | 45.54 | 45.7 |
| AT1G75790.1 | Thale cress | extracellular | 45.17 | 45.5 |
| Zm00001d047156_P002 | Maize | cytosol | 16.58 | 45.05 |
| AT4G12420.2 | Thale cress | extracellular, plasma membrane | 46.08 | 43.1 |
| AT5G48450.1 | Thale cress | extracellular | 48.27 | 42.67 |
| AT4G25240.1 | Thale cress | plasma membrane | 45.17 | 42.11 |
| AT5G51480.1 | Thale cress | extracellular, plasma membrane | 44.63 | 41.39 |
| Zm00001d037444_P001 | Maize | mitochondrion | 19.49 | 39.93 |
| Zm00001d004806_P001 | Maize | plastid | 5.28 | 34.12 |
| Os05t0485800-00 | Rice | plasma membrane | 39.16 | 31.57 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | EntrezGene:842005 | UniProt:A0A178WAD5 | ProteinID:AEE33266.1 | EMBL:AJ249211 |
| EMBL:AK118598 | ArrayExpress:AT1G55560 | EnsemblPlantsGene:AT1G55560 | RefSeq:AT1G55560 | TAIR:AT1G55560 | RefSeq:AT1G55560-TAIR-G |
| EnsemblPlants:AT1G55560.1 | TAIR:AT1G55560.1 | Unigene:At.507 | EMBL:BT005910 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 |
| InterPro:Cu-oxidase_3 | InterPro:CuRO_2_AO-like | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009505 | GO:GO:0009506 | GO:GO:0016491 | GO:GO:0016722 | GO:GO:0030312 | GO:GO:0055114 |
| InterPro:IPR008972 | RefSeq:NP_564697.1 | ProteinID:OAP14012.1 | PFAM:PF00394 | PFAM:PF07731 | PFAM:PF07732 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11709 | PANTHER:PTHR11709:SF27 | UniProt:Q9SMW3 | SUPFAM:SSF49503 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000060DA4 | SEG:seg | Symbol:sks14 | : |
Description
sks14Sks14 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD5]
Coordinates
chr1:-:20754217..20756656
Molecular Weight (calculated)
61665.6 Da
IEP (calculated)
9.251
GRAVY (calculated)
-0.258
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRLLTVLV CLVSTVAIVN AGDPYFFHTW NVTYGTASPL GVPQKVILIN GQFPGPNLNS TSNNNVVINV FNHLDEPFLL TWSGIQHRKN CWQDGVAGTS
101: CPIPAGQNFT YHFQPKDQIG SYFYYPTTSL HRFAGGFGGL RVNSRLLIPV PYADPEDDYT VLLGDWYTAG HTALKNFLDS GRTLGLPNGV LINGKSGKVG
201: GKNEPLFTMK PGKTYKYRLC NVGFKSTLNF RIQNHKMKLV EMEGSHVIQN DYDSLDVHVG QCFSVLVTAN QAAKDYYMVA STRFLKKELS TVGVIRYEGS
301: NVQASTELPK APVGWAWSLN QFRSFRWNLT SNAARPNPQG SYHYGKINIT RSIKLVNSKS VVDGKVRFGF NGVSHVDTET PLKLAEYFQM SEKVFKYNVI
401: KDEPAAKITA LTVQPNVLNI TFRTFVEIIF ENHEKTMQSF HLDGYSFFAV ASEPGRWTPE KRENYNLLDA VSRHTVQVYP KSWSAILLTF DNAGMWNIRS
501: ENLERKYLGE QLYVSVLSPE KSLRDEYNIP LNTNLCGIVK GLPLPAHYS
101: CPIPAGQNFT YHFQPKDQIG SYFYYPTTSL HRFAGGFGGL RVNSRLLIPV PYADPEDDYT VLLGDWYTAG HTALKNFLDS GRTLGLPNGV LINGKSGKVG
201: GKNEPLFTMK PGKTYKYRLC NVGFKSTLNF RIQNHKMKLV EMEGSHVIQN DYDSLDVHVG QCFSVLVTAN QAAKDYYMVA STRFLKKELS TVGVIRYEGS
301: NVQASTELPK APVGWAWSLN QFRSFRWNLT SNAARPNPQG SYHYGKINIT RSIKLVNSKS VVDGKVRFGF NGVSHVDTET PLKLAEYFQM SEKVFKYNVI
401: KDEPAAKITA LTVQPNVLNI TFRTFVEIIF ENHEKTMQSF HLDGYSFFAV ASEPGRWTPE KRENYNLLDA VSRHTVQVYP KSWSAILLTF DNAGMWNIRS
501: ENLERKYLGE QLYVSVLSPE KSLRDEYNIP LNTNLCGIVK GLPLPAHYS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.