Factsheet for Solyc01g005510.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	96.41	96.41
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	80.61	81.05
CDY68876	Canola	cytosol	14.72	73.21
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	8.08	71.43
VIT_00s1643g00010.t01	Wine grape	vacuole	69.3	70.18
VIT_00s1309g00010.t01	Wine grape	vacuole	69.3	70.18
Solyc03g063150.2.1	Tomato	unclear	68.58	68.7
Solyc11g008860.1.1	Tomato	extracellular	68.4	68.65
KRH50513	Soybean	vacuole	66.79	67.64
KRG89471	Soybean	mitochondrion	67.15	67.15
GSMUA_Achr5P27810_001	Banana	extracellular	63.2	66.79
GSMUA_Achr8P01580_001	Banana	extracellular	61.76	66.67
CDY23596	Canola	extracellular, plasma membrane	66.07	66.31
CDY43995	Canola	extracellular, plasma membrane	65.89	66.13
KRH31599	Soybean	extracellular	65.53	66.12
CDX82541	Canola	extracellular, plasma membrane	65.71	65.95
GSMUA_Achr11P...	Banana	vacuole	62.3	65.84
Bra001503.1-P	Field mustard	extracellular, plasma membrane	65.53	65.77
CDX75707	Canola	extracellular, plasma membrane, vacuole	65.35	65.59
Bra030849.1-P	Field mustard	cytosol	19.39	65.45
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	61.4	65.27
CDY50029	Canola	extracellular	63.2	65.19
AT3G13390.1	Thale cress	extracellular, plasma membrane, vacuole	64.81	65.16
AT1G55570.1	Thale cress	extracellular, plasma membrane	64.81	65.05
Bra038001.1-P	Field mustard	extracellular, vacuole	64.81	65.05
CDY24189	Canola	extracellular, plasma membrane, vacuole	64.45	64.8
GSMUA_AchrUn_...	Banana	extracellular	61.22	64.71
Solyc05g055710.2.1	Tomato	extracellular	52.6	64.54
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	64.09	64.44
CDY43353	Canola	extracellular, plasma membrane, vacuole	63.91	64.26
CDX97352	Canola	mitochondrion	56.19	64.14
CDY10549	Canola	endoplasmic reticulum, extracellular, plasma membrane	62.84	63.75
GSMUA_Achr8P09380_001	Banana	extracellular	59.96	63.62
CDY56013	Canola	endoplasmic reticulum, extracellular, plasma membrane	62.48	63.39
Bra030850.1-P	Field mustard	plasma membrane	62.48	63.39
Solyc05g055720.1.1	Tomato	nucleus	10.23	63.33
AT1G55560.1	Thale cress	extracellular	62.3	63.21
CDY43352	Canola	extracellular, plasma membrane	57.63	63.06
KRH50514	Soybean	endoplasmic reticulum, extracellular, vacuole	62.3	62.86
AT3G13400.1	Thale cress	extracellular, plasma membrane	62.12	62.79
CDX75708	Canola	extracellular	61.94	62.61
GSMUA_Achr11P...	Banana	extracellular	59.43	62.57
CDY54363	Canola	extracellular	61.22	62.57
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	62.48	62.48
Bra001504.1-P	Field mustard	extracellular	61.76	62.43
CDX82540	Canola	extracellular	61.58	62.25
Bra034680.1-P	Field mustard	extracellular, plasma membrane	61.76	62.21
CDY43994	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.58	62.14
CDY23597	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.58	62.14
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	61.58	62.14
CDY24188	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.04	61.82
GSMUA_Achr10P...	Banana	extracellular, golgi	62.48	61.7
CDY49392	Canola	extracellular	49.37	61.66
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	61.22	61.55
Bra039389.1-P	Field mustard	plasma membrane	57.45	61.54
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	61.4	61.4
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	61.04	61.15
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	61.04	61.15
CDY68850	Canola	extracellular	33.21	61.06
Zm00001d043090_P001	Maize	vacuole	61.04	61.04
EES01652	Sorghum	extracellular, golgi, vacuole	61.04	60.93
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	60.5	60.83
Zm00001d012524_P001	Maize	vacuole	61.04	60.82
Os01t0816700-01	Rice	plasma membrane	60.32	60.76
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	60.86	60.64
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	61.04	59.65
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	59.78	59.46
EES19711	Sorghum	extracellular	58.71	58.5
TraesCS1B01G314600.1	Wheat	plasma membrane	58.53	58.32
TraesCS1D01G303600.1	Wheat	extracellular	58.53	58.32
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	58.17	57.96
GSMUA_Achr3P09610_001	Banana	plastid	62.66	57.12
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	61.94	55.2
Solyc01g111970.2.1	Tomato	extracellular	52.24	54.29
Bra002824.1-P	Field mustard	cytosol	10.23	53.77
CDY32795	Canola	cytosol	9.87	52.88
Solyc07g052230.2.1	Tomato	extracellular	50.81	52.7
Solyc02g065170.2.1	Tomato	nucleus	50.27	51.95
Solyc07g052240.2.1	Tomato	nucleus	50.45	51.75
Solyc02g090360.2.1	Tomato	extracellular	49.55	51.3
Solyc04g082140.2.1	Tomato	extracellular	49.55	51.11
Solyc02g080670.2.1	Tomato	nucleus	50.09	50.91
Solyc12g094460.1.1	Tomato	extracellular	49.01	50.18
Solyc02g080700.1.1	Tomato	cytosol	8.8	49.49
Solyc12g094470.1.1	Tomato	nucleus	47.4	48.62
Zm00001d047156_P002	Maize	cytosol	16.34	45.05
Solyc09g055930.2.1	Tomato	extracellular	46.14	44.01
Solyc04g081520.1.1	Tomato	extracellular	42.73	43.99
Solyc08g079090.2.1	Tomato	extracellular	44.7	42.27
Solyc03g083900.2.1	Tomato	extracellular	44.7	42.06
Solyc05g055490.1.1	Tomato	extracellular	40.22	40.95
Zm00001d037444_P001	Maize	mitochondrion	18.67	38.81
Os05t0485800-00	Rice	plasma membrane	40.22	32.89
Solyc11g008030.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	42.19	32.1
Zm00001d004806_P001	Maize	plastid	4.13	27.06

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	ncoils:Coil	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:CuRO_1_AAO-like	InterPro:CuRO_2_AO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009505	GO:GO:0009506	GO:GO:0016491	GO:GO:0016722	GO:GO:0030312	GO:GO:0055114
InterPro:IPR008972	UniProt:K4ASB7	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF27	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g005510.2	EnsemblPlants:Solyc01g005510.2.1	UniParc:UPI0002761AD4
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:346845..349013

Molecular Weight (calculated)

62876.9 Da

IEP (calculated)

8.556

GRAVY (calculated)

-0.358

Length

557 amino acids

Sequence
(BLAST)

001: MERTSMTVVC LLVCLSFVLV KGEDPYLRFE WNVTYGTIAP LGVPQQGILI NGQLPGPRIN CTSNNNIVVN VFNHLDEPLL LTWNGVQQRK NSWQDGTPGT
101: MCPIMPGTNF TYRFQVKDQI GSFFYFPTTD LHRAAGGFGA INVHSRALIP VPFDNPADDY SVFVGDWYNK GYKSLKKILD GGRTIGRPDG IHINGKSEKV
201: GEKVAEPLYK MEAGKTYRYR FCNVGMRTSV NVRIQGHPMK LVEIEGSHTV QNVYESLDLH VGQCLSVLVT ADQEPKDYYM IVSSRFLKQA ELSSVSIIRY
301: VNGKGPASSD LPAPPPENTQ GIAWSMNQFR SFRWNLTASA ARPNPQGSYH YGQINITRTF KIVNSRTEVD GKLRYALNGI SHTDSETPFK LAEYFGATDK
401: VFKYDLMPDQ PSTPDDKVTI ASNIKNATFR NFVEIVFENH EKTIQTYHLD GYSFFAVAVE PGKWTPEKRK NYNLVDAISR HSIQVYPNSW AAVMTTLDNA
501: GLWSLRSEMW ERFYLGQQLY FSVLSPARSL RDEYNLPDNH PLCGIVKTMP MPSPYKA

Best Arabidopsis Sequence Match ( AT1G55570.1 )
(BLAST)

001: MKGGVKLLAV CLCVATATVM MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN INSTSNNNVI VNVFNNLDEP FLITWAGIQH RKNCWQDGTA
101: GTMCPIPPGQ NFTYHFQPKD QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF LDSGRTIGRP DGILINGKSG
201: KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY
301: EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY
401: DTISDNPNPD QIKNIKIEPN VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV QVYPKCWAAI LLTFDNCGMW
501: NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC GLVKGKPKVN PYAGA

Arabidopsis Description

sks12At1g55570/T5A14_1 [Source:UniProtKB/TrEMBL;Acc:Q9ZVV4]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.