Factsheet for Solyc07g052230.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	85.47	95.62
KRH26769	Soybean	endoplasmic reticulum	80.63	80.78
VIT_12s0059g00770.t01	Wine grape	extracellular	81.38	80.78
Solyc07g052240.2.1	Tomato	nucleus	80.63	79.74
KRH25361	Soybean	mitochondrion, nucleus	78.21	78.21
KRH56153	Soybean	mitochondrion, nucleus	78.21	78.21
GSMUA_Achr5P26560_001	Banana	extracellular	46.74	72.33
TraesCS7B01G359700.1	Wheat	extracellular	72.81	72.14
TraesCS7A01G459400.1	Wheat	extracellular	72.07	71.14
HORVU7Hr1G105620.1	Barley	extracellular	71.69	71.03
TraesCS7D01G447200.1	Wheat	extracellular	71.51	70.85
Os06t0678800-01	Rice	extracellular	71.51	70.85
Zm00001d014366_P002	Maize	extracellular	71.51	70.07
EER90222	Sorghum	extracellular	70.95	69.78
Solyc02g080670.2.1	Tomato	nucleus	70.58	69.16
GSMUA_Achr5P26550_001	Banana	cytosol	16.57	68.46
TraesCS2B01G274800.1	Wheat	vacuole	69.27	68.26
Solyc01g111970.2.1	Tomato	extracellular	67.97	68.1
Solyc04g082140.2.1	Tomato	extracellular	68.34	67.96
TraesCS2D01G230800.1	Wheat	extracellular	68.9	67.89
TraesCS2A01G224600.1	Wheat	extracellular	68.72	67.71
Solyc02g080700.1.1	Tomato	cytosol	12.48	67.68
Os07t0510900-01	Rice	extracellular, peroxisome	58.47	67.67
HORVU2Hr1G047260.1	Barley	extracellular, golgi, vacuole	69.09	67.33
Solyc12g094460.1.1	Tomato	extracellular	67.97	67.1
EER97278	Sorghum	extracellular, golgi	67.97	66.61
Solyc12g094470.1.1	Tomato	nucleus	65.74	65.01
Zm00001d021599_P002	Maize	extracellular, plasma membrane, vacuole	67.23	64.7
Solyc02g065170.2.1	Tomato	nucleus	59.4	59.18
Solyc02g090360.2.1	Tomato	extracellular	58.1	57.99
Os07t0510833-00	Rice	extracellular	10.24	55.0
Solyc05g055710.2.1	Tomato	extracellular	43.39	51.32
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	52.7	50.81
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	51.4	49.82
Solyc11g008860.1.1	Tomato	extracellular	51.4	49.73
Solyc03g063150.2.1	Tomato	unclear	50.65	48.92
Solyc05g055490.1.1	Tomato	extracellular	49.35	48.45
Solyc04g081520.1.1	Tomato	extracellular	46.55	46.21
Solyc09g055930.2.1	Tomato	extracellular	48.98	45.03
Solyc05g055720.1.1	Tomato	nucleus	7.45	44.44
Solyc08g079090.2.1	Tomato	extracellular	48.04	43.8
Solyc03g083900.2.1	Tomato	extracellular	46.93	42.57
Solyc11g008030.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	47.11	34.56

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016722	GO:GO:0030312	GO:GO:0055114
InterPro:IPR008972	UniProt:K4CFC2	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF106	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc07g052230.2	EnsemblPlants:Solyc07g052230.2.1	TMHMM:TMhelix
UniParc:UPI000276B651	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:-:60723150..60726170

Molecular Weight (calculated)

59936.8 Da

IEP (calculated)

7.488

GRAVY (calculated)

-0.241

Length

537 amino acids

Sequence
(BLAST)

001: MVKEWSTWLP LMAMVMMFLH VNFIHGEDPY RFYAWNVTYG DIYPLGVKQQ GILINGQFPG PPIQCVTNDN LIINVFNNLD EPFLISWNGV EQRRNSWQDG
101: VYGTNCPIPP GKNFTYVLQV KDQIGSFYYF PSLAFHKAAG GFGSINIASR SVIPVPFPSP AGEFSILTGD WFKQNHSDLK AILDGGHDLP FPDGLLINGH
201: GSNGYTFTVD QGKTYRFRIS NVGLTTSVNF RIQGHKMTVV EVEGTHTVQN AYDSLDIHLG QSYSVLLTAD QPAQDYYIVV STRFTSQVLT ATSTLRYSNS
301: AGSVSGPPPG GPTIEIDWSF NQARSLRRNL TASGPRPNPQ GSYHYGLINT TRTIRLANSA PIINGKQRYA INSVSFIPAD TPLKLADHFN IPGVFTLGSI
401: PDSPTGSGAY LQTSVMSADF RAYTEVVFEN LEDSVQSYHI DGHHFFVVGM GRGEWTPASR LTYNLRDTIS RSTVQVYPKS WTALYMPLDN VGMWNIRSQN
501: WARQYLGQQF YLRVYSPVNS WRDESPVPSN VLHCGRA

Best Arabidopsis Sequence Match ( AT1G76160.1 )
(BLAST)

001: MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG
101: TTCPIPPGKN YTYILQMKDQ IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL DNGKKLPLPD GILINGRSSG
201: ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP
401: TGGGIYLDTS VMQVDYRTFV EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI LIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP L

Arabidopsis Description

sks5Sks5 [Source:UniProtKB/TrEMBL;Acc:A0A178WJJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.