Factsheet for Solyc11g008030.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18028	Soybean	cytosol	28.42	66.03
KRH38383	Soybean	cytosol, extracellular, peroxisome	45.22	63.29
KRG93978	Soybean	extracellular	26.37	61.86
KRG92132	Soybean	extracellular	50.41	61.71
Solyc05g055490.1.1	Tomato	extracellular	45.77	61.24
KRH34656	Soybean	extracellular	49.04	59.83
KRG92134	Soybean	cytosol, endoplasmic reticulum, extracellular	47.54	57.71
Solyc02g080700.1.1	Tomato	cytosol	6.56	48.48
Solyc01g111970.2.1	Tomato	extracellular	35.25	48.13
Solyc02g065170.2.1	Tomato	nucleus	35.38	48.05
Solyc02g090360.2.1	Tomato	extracellular	35.11	47.77
Solyc07g052230.2.1	Tomato	extracellular	34.56	47.11
Solyc02g080670.2.1	Tomato	nucleus	34.97	46.72
Solyc07g052240.2.1	Tomato	nucleus	34.43	46.41
Solyc09g055930.2.1	Tomato	extracellular	36.48	45.72
Solyc12g094460.1.1	Tomato	extracellular	33.88	45.59
Solyc04g082140.2.1	Tomato	extracellular	32.51	44.07
Solyc12g094470.1.1	Tomato	nucleus	32.65	44.01
Solyc08g079090.2.1	Tomato	extracellular	35.38	43.97
Solyc04g081520.1.1	Tomato	extracellular	32.24	43.62
Solyc05g055720.1.1	Tomato	nucleus	5.19	42.22
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	32.1	42.19
Solyc11g008860.1.1	Tomato	extracellular	31.69	41.8
Solyc05g055710.2.1	Tomato	extracellular	25.82	41.63
Solyc03g083900.2.1	Tomato	extracellular	33.2	41.05
Solyc03g063150.2.1	Tomato	unclear	31.01	40.83
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	29.51	38.99

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016722	GO:GO:0055114
InterPro:IPR008972	UniProt:K4D564	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF125	SUPFAM:SSF49503	EnsemblPlantsGene:Solyc11g008030.1	EnsemblPlants:Solyc11g008030.1.1	TMHMM:TMhelix	UniParc:UPI000276A729
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:2243066..2250910

Molecular Weight (calculated)

82321.2 Da

IEP (calculated)

5.756

GRAVY (calculated)

-0.382

Length

732 amino acids

Sequence
(BLAST)

001: MRELPIWLVI LLVLFYFISM QVIIINGEEI FLEWHVDEDY NIKPVSVDQP VITINGKFPG PLLNATTNDN IHVNVFNDMD KYPVLITWNG IQQRHNSWQD
101: GVSGTNCAIR PNTNWTYEFQ LKDQIGSFFY FPTLHYEKAG GAFGPIQINN RVRIQPPFAE PEGDFDLLIG DWYENSFKVI GDKLAHEGYN KTPNMMLMNG
201: KGSYLDPKAK SNESFTINQG KTYRLRISNV GSEWSFNFRI QNHTMLLVET EGSYTNQITL NSLDVHVGQS YSVLVTADQD AADYYIVATA KMANSTQLKT
301: LQVVGVLHYE NSTKPANGPI PNGPGPFDVN FSISQARSIR WNLTTGAARP NPQGTFNVSN VTLSQTFVLQ NSLNYKNGMI NYAINNVSYA TPKTPLKLAD
401: YYLNGAGVYE LDKFPANVSL PEVVYGTFVV SGEHKGWLEI VFKNELQVMD SWHLDGFSFF VVGYGFGNWK PESRSRYNLH DPIVRSTVQV YPKGWTAVYV
501: YLDNPGMWNL RSQKLKNWFL GQELYIRVYD SDPNPAKELI PPKNLLYCGI VQTPPPATPS PKPEPVPSPV APIAPPPPAP SSTTTTKIKW EIMEALEEVV
601: VCPSKDLFHI VKGKRTKRLR LQSPNIPFSL TSSHDSLNAC DIAIENSNNN NNIDNYNRDD VACNDEAIAC NNNNNNNNNN INEALSSVAS SEVFINTFTE
701: EEEETAKCLV LLSKGRDDHP PPPRTLRHPP TP

Best Arabidopsis Sequence Match ( AT1G21850.1 )
(BLAST)

001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F

Arabidopsis Description

sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.