Factsheet for Solyc11g008860.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

extracellular: 22364583

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	94.05	93.55
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	8.65	76.19
Solyc03g063150.2.1	Tomato	unclear	75.5	75.36
CDY68876	Canola	cytosol	15.14	75.0
Solyc05g055710.2.1	Tomato	extracellular	59.1	72.25
Solyc05g055720.1.1	Tomato	nucleus	11.71	72.22
VIT_00s1309g00010.t01	Wine grape	vacuole	68.83	69.45
VIT_00s1643g00010.t01	Wine grape	vacuole	68.83	69.45
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	69.01	69.13
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	68.65	68.4
Bra030849.1-P	Field mustard	cytosol	20.18	67.88
KRH31599	Soybean	extracellular	67.03	67.39
AT1G55560.1	Thale cress	extracellular	66.13	66.85
CDY10549	Canola	endoplasmic reticulum, extracellular, plasma membrane	66.13	66.85
CDY50029	Canola	extracellular	64.86	66.67
CDY23596	Canola	extracellular, plasma membrane	66.49	66.49
Bra030850.1-P	Field mustard	plasma membrane	65.77	66.48
CDY56013	Canola	endoplasmic reticulum, extracellular, plasma membrane	65.77	66.48
GSMUA_Achr11P...	Banana	vacuole	63.06	66.41
KRH50513	Soybean	vacuole	65.77	66.36
CDY43995	Canola	extracellular, plasma membrane	66.31	66.31
AT1G55570.1	Thale cress	extracellular, plasma membrane	66.31	66.31
Bra038001.1-P	Field mustard	extracellular, vacuole	66.31	66.31
GSMUA_Achr5P27810_001	Banana	extracellular	62.88	66.22
CDX82541	Canola	extracellular, plasma membrane	66.13	66.13
Bra001503.1-P	Field mustard	extracellular, plasma membrane	65.95	65.95
GSMUA_Achr8P01580_001	Banana	extracellular	61.26	65.89
AT3G13390.1	Thale cress	extracellular, plasma membrane, vacuole	65.59	65.7
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	61.98	65.65
CDX97352	Canola	mitochondrion	57.66	65.57
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	65.41	65.52
CDY49392	Canola	extracellular	52.61	65.47
CDX75707	Canola	extracellular, plasma membrane, vacuole	65.41	65.41
CDY43353	Canola	extracellular, plasma membrane, vacuole	65.23	65.34
KRG89471	Soybean	mitochondrion	65.23	64.99
CDY24189	Canola	extracellular, plasma membrane, vacuole	64.86	64.98
CDY54363	Canola	extracellular	63.6	64.77
GSMUA_Achr8P09380_001	Banana	extracellular	60.9	64.38
CDX82540	Canola	extracellular	63.78	64.25
CDX75708	Canola	extracellular	63.6	64.07
Bra001504.1-P	Field mustard	extracellular	63.6	64.07
KRH50514	Soybean	endoplasmic reticulum, extracellular, vacuole	63.42	63.77
AT3G13400.1	Thale cress	extracellular, plasma membrane	63.24	63.7
CDY24188	Canola	endoplasmic reticulum, extracellular, plasma membrane	63.06	63.64
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	63.24	63.59
CDY43994	Canola	endoplasmic reticulum, extracellular, plasma membrane	63.24	63.59
CDY23597	Canola	endoplasmic reticulum, extracellular, plasma membrane	63.06	63.41
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	63.24	63.36
GSMUA_Achr11P...	Banana	extracellular	60.36	63.33
Bra039389.1-P	Field mustard	plasma membrane	59.28	63.27
CDY43352	Canola	extracellular, plasma membrane	58.02	63.26
CDY68850	Canola	extracellular	34.41	63.04
Bra034680.1-P	Field mustard	extracellular, plasma membrane	62.52	62.75
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	62.52	62.3
GSMUA_Achr10P...	Banana	extracellular, golgi	63.06	62.06
GSMUA_AchrUn_...	Banana	extracellular	58.92	62.05
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	61.62	61.51
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	61.26	61.37
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	61.44	61.33
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	61.44	61.22
EES19711	Sorghum	extracellular	60.9	60.47
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	60.9	60.47
Os01t0816700-01	Rice	plasma membrane	60.0	60.22
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	61.26	59.65
Zm00001d012524_P001	Maize	vacuole	59.82	59.39
EES01652	Sorghum	extracellular, golgi, vacuole	59.64	59.32
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	59.64	59.11
Zm00001d043090_P001	Maize	vacuole	59.28	59.07
TraesCS1D01G303600.1	Wheat	extracellular	58.74	58.32
TraesCS1B01G314600.1	Wheat	plasma membrane	58.74	58.32
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	58.2	57.78
GSMUA_Achr3P09610_001	Banana	plastid	61.44	55.81
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	61.26	54.4
Solyc01g111970.2.1	Tomato	extracellular	52.43	54.29
Solyc07g052240.2.1	Tomato	nucleus	51.17	52.3
CDY32795	Canola	cytosol	9.73	51.92
Bra002824.1-P	Field mustard	cytosol	9.91	51.89
Solyc12g094460.1.1	Tomato	extracellular	50.63	51.65
Solyc04g082140.2.1	Tomato	extracellular	50.09	51.48
Solyc07g052230.2.1	Tomato	extracellular	49.73	51.4
Solyc02g065170.2.1	Tomato	nucleus	49.91	51.39
Solyc02g080670.2.1	Tomato	nucleus	50.45	51.09
Solyc02g090360.2.1	Tomato	extracellular	49.37	50.93
Solyc12g094470.1.1	Tomato	nucleus	48.47	49.54
Zm00001d047156_P002	Maize	cytosol	16.22	44.55
Solyc02g080700.1.1	Tomato	cytosol	7.75	43.43
Solyc09g055930.2.1	Tomato	extracellular	45.41	43.15
Solyc03g083900.2.1	Tomato	extracellular	45.05	42.23
Solyc08g079090.2.1	Tomato	extracellular	43.96	41.43
Solyc04g081520.1.1	Tomato	extracellular	40.0	41.04
Solyc05g055490.1.1	Tomato	extracellular	40.36	40.95
Zm00001d037444_P001	Maize	mitochondrion	19.1	39.55
Os05t0485800-00	Rice	plasma membrane	39.64	32.31
Zm00001d004806_P001	Maize	plastid	4.86	31.76
Solyc11g008030.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	41.8	31.69

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0016491
GO:GO:0016722	GO:GO:0030312	GO:GO:0055114	InterPro:IPR008972	UniProt:K4D5E6	PFAM:PF00394
PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF27	SUPFAM:SSF49503	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc11g008860.1	EnsemblPlants:Solyc11g008860.1.1	UniParc:UPI000276936B	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:3041039..3043027

Molecular Weight (calculated)

61899.8 Da

IEP (calculated)

9.443

GRAVY (calculated)

-0.367

Length

555 amino acids

Sequence
(BLAST)

001: MNKKLGCVLS ILLAITLTIS VNGEDPYLFH EWKVTYGTLS PLGVPQKVIL INGQFPGPRI NGTSNNNVVV NVFNQLDEPL LLTWSGIQQR KNSWQEGTLG
101: NNCPIPPGAN FTYRFQVKDQ IGSYYYYPTT STHRAAGGYG GISVLSRALI PVPFETPEAD HMVLAGDWYT KSHVELKRML DSGRALGRPT GVLINGKSGK
201: GDGKDEPMFT VIAGKTYRFR FCNVGMKDSI NVRMQGHTMK LVEIEGSHTV QNVYESIDIH LGQCFSVLVT ANQEPKDYYL VVSTRFTKDS HVATATIRYA
301: NGKGPASPEL PKAPEGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGQIN ITRTIKLVTS AGQVDGKLRY ALNGVSHVDT ATPIKLAEYY GAGDKVFKYN
401: LIKDEYEPNP GQDKITVAPN VVNATYRNYV EIVIENHGKT VQSWHLSGHS FFAVGIEPGR WAPERRKNYN LLDAVSRNTI QVYPKSFAVI MTTLDNAGLW
501: NLRSNSLERN YLGHQLYFSV LSPNKSIKDE YNMPDNDLLC GIVKDMPKPT PYKAN

Best Arabidopsis Sequence Match ( AT1G55570.1 )
(BLAST)

001: MKGGVKLLAV CLCVATATVM MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN INSTSNNNVI VNVFNNLDEP FLITWAGIQH RKNCWQDGTA
101: GTMCPIPPGQ NFTYHFQPKD QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF LDSGRTIGRP DGILINGKSG
201: KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY
301: EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY
401: DTISDNPNPD QIKNIKIEPN VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV QVYPKCWAAI LLTFDNCGMW
501: NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC GLVKGKPKVN PYAGA

Arabidopsis Description

sks12At1g55570/T5A14_1 [Source:UniProtKB/TrEMBL;Acc:Q9ZVV4]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.