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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 99.82 99.82
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 99.46 99.46
Bra039389.1-P Field mustard plasma membrane 91.49 97.12
Bra001504.1-P Field mustard extracellular 95.65 95.83
AT3G13400.1 Thale cress extracellular, plasma membrane 95.11 95.28
Bra030850.1-P Field mustard plasma membrane 87.86 88.34
Bra030849.1-P Field mustard cytosol 23.01 76.97
Bra038001.1-P Field mustard extracellular, vacuole 75.18 74.77
Bra001503.1-P Field mustard extracellular, plasma membrane 74.82 74.41
Bra039388.1-P Field mustard extracellular, plasma membrane, vacuole 74.64 74.37
KRH31599 Soybean extracellular 72.1 72.1
Bra034680.1-P Field mustard extracellular, plasma membrane 69.93 69.8
VIT_00s1309g00010.t01 Wine grape vacuole 69.38 69.64
VIT_00s1643g00010.t01 Wine grape vacuole 69.38 69.64
GSMUA_Achr11P... Banana vacuole 66.3 69.45
Bra002825.1-P Field mustard extracellular, golgi, vacuole 69.57 69.31
KRG89471 Soybean mitochondrion 69.75 69.12
KRH50513 Soybean vacuole 68.84 69.09
GSMUA_Achr5P27810_001 Banana extracellular 65.94 69.07
GSMUA_Achr8P01580_001 Banana extracellular 64.31 68.8
GSMUA_Achr9P04930_001 Banana endoplasmic reticulum, extracellular, plasma membrane 65.04 68.51
KRH50514 Soybean endoplasmic reticulum, extracellular, vacuole 67.75 67.75
GSMUA_Achr8P09380_001 Banana extracellular 63.59 66.86
GSMUA_Achr11P... Banana extracellular 63.22 65.97
GSMUA_AchrUn_... Banana extracellular 62.68 65.65
GSMUA_Achr10P... Banana extracellular, golgi 66.12 64.72
PGSC0003DMT400016672 Potato endoplasmic reticulum 64.67 64.44
Solyc01g056310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 64.49 64.26
PGSC0003DMT400002554 Potato endoplasmic reticulum, extracellular, golgi 64.49 64.03
PGSC0003DMT400041845 Potato extracellular, plasma membrane, vacuole 64.31 63.62
Solyc05g055720.1.1 Tomato nucleus 10.33 63.33
Solyc03g063150.2.1 Tomato unclear 63.77 63.31
Solyc11g008860.1.1 Tomato extracellular 63.59 63.24
Bra002824.1-P Field mustard cytosol 12.14 63.21
GSMUA_Achr9P16870_001 Banana extracellular, plasma membrane, vacuole 63.41 62.84
PGSC0003DMT400010905 Potato extracellular, plasma membrane 63.77 62.08
Solyc01g005510.2.1 Tomato extracellular, plasma membrane, vacuole 62.14 61.58
PGSC0003DMT400082031 Potato extracellular, plasma membrane, vacuole 61.96 61.4
TraesCS1D01G303600.1 Wheat extracellular 61.96 61.18
TraesCS1B01G314600.1 Wheat plasma membrane 61.78 61.0
TraesCS1A01G304100.1 Wheat extracellular, golgi, plasma membrane 61.78 61.0
HORVU1Hr1G069130.1 Barley extracellular, golgi, plasma membrane 61.78 60.89
PGSC0003DMT400060352 Potato extracellular 60.87 60.87
Solyc05g055710.2.1 Tomato extracellular 49.28 59.91
Os01t0816700-01 Rice plasma membrane 59.6 59.49
EES19711 Sorghum extracellular 59.78 59.03
EES01652 Sorghum extracellular, golgi, vacuole 59.42 58.78
HORVU4Hr1G048550.1 Barley cytosol, extracellular 6.7 58.73
Zm00001d038521_P001 Maize extracellular, plasma membrane, vacuole 59.24 58.5
Zm00001d043090_P001 Maize vacuole 58.88 58.35
Zm00001d012524_P001 Maize vacuole 58.88 58.14
Zm00001d010630_P003 Maize extracellular, golgi, vacuole 59.96 58.07
HORVU3Hr1G080360.1 Barley extracellular, golgi, vacuole 58.15 57.63
TraesCS3D01G333700.1 Wheat extracellular, golgi, vacuole 57.97 57.55
GSMUA_Achr3P09610_001 Banana plastid 63.59 57.45
TraesCS3B01G371800.1 Wheat extracellular, golgi, vacuole 57.79 57.37
TraesCS3A01G340200.1 Wheat extracellular, golgi, vacuole 57.43 57.22
Bra034943.1-P Field mustard extracellular 54.17 55.17
GSMUA_Achr5P07530_001 Banana extracellular, golgi, vacuole 62.32 55.04
Bra015781.1-P Field mustard extracellular 53.8 54.9
Bra012117.1-P Field mustard extracellular, golgi, vacuole 53.44 54.13
Bra037137.1-P Field mustard extracellular 52.72 53.79
Bra008241.1-P Field mustard extracellular 53.26 53.65
Bra036800.1-P Field mustard extracellular 52.54 53.6
Bra025818.1-P Field mustard extracellular 51.45 51.54
Bra013582.1-P Field mustard extracellular 49.82 50.83
Bra032154.1-P Field mustard extracellular 49.09 50.28
Bra017796.1-P Field mustard extracellular 48.73 49.81
Bra008223.1-P Field mustard cytosol, extracellular, nucleus 41.85 46.86
Bra022513.1-P Field mustard extracellular 46.38 46.63
Bra018479.1-P Field mustard plasma membrane 47.28 44.54
Bra033564.1-P Field mustard extracellular, mitochondrion, nucleus, plastid 51.27 44.29
Bra000773.1-P Field mustard extracellular 46.92 44.27
Bra022551.1-P Field mustard plasma membrane 47.83 44.22
Bra020700.1-P Field mustard extracellular, plasma membrane, vacuole 47.28 43.87
Zm00001d047156_P002 Maize cytosol 15.94 43.56
Bra029171.1-P Field mustard extracellular 45.29 42.73
Bra013877.1-P Field mustard plasma membrane 45.47 42.04
Bra034914.1-P Field mustard extracellular 5.8 41.03
Zm00001d037444_P001 Maize mitochondrion 19.2 39.55
Zm00001d004806_P001 Maize plastid 5.07 32.94
Os05t0485800-00 Rice plasma membrane 38.77 31.42
Bra011721.1-P Field mustard mitochondrion, plastid 48.01 22.34
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10EnsemblPlantsGene:Bra034679EnsemblPlants:Bra034679.1EnsemblPlants:Bra034679.1-PInterPro:Cu-oxidase
InterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_2_AO-likeInterPro:CupredoxinGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114
InterPro:IPR008972UniProt:M4F0T4PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709
PANTHER:PTHR11709:SF27SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002548082SEG:seg
Description
AT3G13400 (E=1e-308) sks13 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase
Coordinates
chrA05:-:20927786..20930178
Molecular Weight (calculated)
61960.8 Da
IEP (calculated)
9.215
GRAVY (calculated)
-0.262
Length
552 amino acids
Sequence
(BLAST)
001: MMQGGKLLTV FVCLVSSVAL VNAGDPYFYY TWNVTYGTVA PLGIPQQVIL INGQFPGPNL NSTSNNNVVI NVFNNLDEPF LLTWSGLQHR KNSWQDGVTG
101: TTCPIPAGTN YTYHFQPKDQ IGSYFYYPST ALHRFSGGFG GLRVNSRLLI PVPYADPEDD YTVLINDWYT KSHTALKTFL DSGRTLGSPD GVLINGKSGK
201: VGGPNVPLFT MKPGKTYKYR ICNVGFKSTL NFRIQGHKMK LVEMEGSHVL QNDYDSLDVH VGQCFAVLVT ADQNAKNYYM VASTRFLKKE VSTVGVMSYE
301: GSNVQASSEL PKAPVGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGKIN ITRTIKLANT KNLVNGKVRF GLNGVSHVDT ETPLKLAEYF EMSEKVFKYN
401: VIKDEPAAKI TTLTVEPNVL NITFRTFVEI VFENHEKSMQ SFHLDGYSFF SVASEPGTWT PEKRNNYNLL DAVSRHTVQV FPKSWSAILL TFDNAGMWNI
501: RSENWERRYL GQQMYVSVLS PEKSLRDEYN IPLNTNLCGI VKGLPLPTPY TI
Best Arabidopsis Sequence Match ( AT3G13400.2 )
(BLAST)
001: MQGGRLLTVL VCLASTVALV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT
101: SCPIPAGTNF TYHFQPKDQI GSYFYYPSTA LHRFAGGFGG LRVNSRLLIP VPYADPEDDR TILINDWYAK SHTALKNFLD SGRTLGSPDG VLINGKSGKL
201: GGNNAPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVMSYEG
301: SNVQASSDIP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK NLVNGKVRFG FNGVSHVDTE TPLKLAEYFG MSEKVFKYNV
401: IKDEPAAKIT TLTVEPNVLN ITFRTFVEVV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY PKSWSAILLT FDNAGMWNIR
501: SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV KGLPLPTPYT I
Arabidopsis Description
sks13AT3g13400/MRP15_3 [Source:UniProtKB/TrEMBL;Acc:Q9LJF1]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.