Factsheet for Bra033564.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, nucleus

Predictor Summary:

plastid 3
vacuole 1
nucleus 1
plasma membrane 1
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54804	Canola	extracellular, mitochondrion, nucleus, plastid	100.0	100.0
CDY64276	Canola	cytosol	93.11	96.91
AT4G38420.1	Thale cress	extracellular	70.58	82.15
PGSC0003DMT400048000	Potato	extracellular	58.84	72.03
VIT_03s0038g03570.t01	Wine grape	extracellular	60.09	70.85
KRH24127	Soybean	nucleus	59.94	70.4
KRH29100	Soybean	nucleus	60.09	70.2
Bra022513.1-P	Field mustard	extracellular	60.25	70.13
Solyc01g111970.2.1	Tomato	extracellular	58.53	69.78
Bra015781.1-P	Field mustard	extracellular	58.37	68.95
Bra034943.1-P	Field mustard	extracellular	57.12	67.34
Bra008241.1-P	Field mustard	extracellular	57.75	67.34
GSMUA_Achr5P11580_001	Banana	extracellular	56.02	66.42
Bra013582.1-P	Field mustard	extracellular	54.62	64.51
Bra025818.1-P	Field mustard	extracellular	53.05	61.52
Bra037137.1-P	Field mustard	extracellular	47.1	55.64
Bra036800.1-P	Field mustard	extracellular	46.48	54.9
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	45.7	53.58
Bra030849.1-P	Field mustard	cytosol	13.62	52.73
Bra039389.1-P	Field mustard	plasma membrane	41.78	51.35
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	44.29	51.27
Bra032154.1-P	Field mustard	extracellular	43.19	51.21
Bra001504.1-P	Field mustard	extracellular	44.13	51.18
Bra038001.1-P	Field mustard	extracellular, vacuole	44.13	50.81
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	43.98	50.72
Bra001503.1-P	Field mustard	extracellular, plasma membrane	43.98	50.63
Bra017796.1-P	Field mustard	extracellular	42.41	50.19
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	43.04	49.64
Bra030850.1-P	Field mustard	plasma membrane	42.41	49.36
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	36.93	47.87
Bra034680.1-P	Field mustard	extracellular, plasma membrane	40.69	47.02
Bra018479.1-P	Field mustard	plasma membrane	40.38	44.03
Bra000773.1-P	Field mustard	extracellular	40.22	43.93
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	40.85	43.87
Bra002824.1-P	Field mustard	cytosol	7.2	43.4
Bra029171.1-P	Field mustard	extracellular	39.12	42.73
Bra022551.1-P	Field mustard	plasma membrane	39.59	42.38
Bra013877.1-P	Field mustard	plasma membrane	39.44	42.21
Bra034914.1-P	Field mustard	extracellular	4.54	37.18
Bra011721.1-P	Field mustard	mitochondrion, plastid	41.31	22.26

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra033564	EnsemblPlants:Bra033564.1	EnsemblPlants:Bra033564.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:CuRO_3_AO-like	InterPro:Cupredoxin	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0016491	GO:GO:0030312
GO:GO:0055114	InterPro:IPR008972	UniProt:M4EXM7	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF64	SUPFAM:SSF49503	UniParc:UPI000253F953	SEG:seg	:

Description

AT4G38420 (E=4e-267) sks9 | sks9 (SKU5 Similar 9); copper ion binding / oxidoreductase

Coordinates

chrA06:-:26207257..26211982

Molecular Weight (calculated)

72035.2 Da

IEP (calculated)

9.472

GRAVY (calculated)

-0.441

Length

639 amino acids

Sequence
(BLAST)

001: MYFFALLIEY RGPPTPSIHW SAQRRTADYS RASEQQEADS AASKGCGIFE FLKKKPEDVP SSDVTKENKG EEKPSLAERI HLFDSSSSSD EESGENGEVK
101: EKKRKKAEGE VQAEDPYRFF DWRVTYGNIY PLGIPQRGIL INGQFPGPEI YSVTNDNLII NVHNDLDEPF LLSWNGVQLR KNSYQDGVYG TTCPIPPGKN
201: YTYAIQVKDQ IGSFFYFPSL AFHKAAGAFG GLRVLSRPRI PVPFPEPAGD FTFLIGDWYS QHDHKNLKAL LDRGHRLPFP DKVLINGNGV NFSSSLTVHK
301: GKTYRFRISN VGLQHSLNFK IVDHQMKLVE VEGTHTIQSM YSSLDIHVGQ SYSVLVTMDQ PEKDYSIVVA TRFAAKKILV GSTLHYSNSR QSLSSASLSA
401: RGPADELDWS IKQARSIRTN LTASGPRPNP QGSYHYGLIN ISRTLVLESS AGLVKRKQRY AINGVSFVHS DTPLKLADYF NIRGVFKVGS IPDQPRRGGG
501: IRLDTAVMGA NHRAFIEIVF QNREKIVQSY HLDGYSFWVV GMDRGTWSHA SRREYNLVDA VSRSTTQVYP ESWTAVYVAL DNVGMWNLRS EFWARQYLGQ
601: QLYLRVYSSV HSLRDEYLVP KNALLCGRAS NMQRPIITP

Best Arabidopsis Sequence Match ( AT4G38420.1 )
(BLAST)

001: MCWWLNGAVW TMMMMTISII SFVQADDPYR FFDWRVTYGN ISPLGIPQRG ILINGQYPGP DIYSVTNDNL IINVHNDLDE PFLLSWNGVQ LRKNSYQDGV
101: YGTTCPIPPG KNYTYAIQVK DQIGSFFYFP SLAVHKAAGG FGGFRILSRP RIPVPFPEPA GDFTFLIGDW FKHDHKVLKA ILDRGHKLPL PQGVLINGQG
201: VSYMSSITVH KGKTYRFRIS NVGLQHTLNF RIQGHQMKLV EVEGTHTVQS MYTSLDIHVG QSYSVLVTMD QPDQDYDIVV STKFVAKKLL VSSTIHYSNS
301: RHSHSSSANS VHVQQPADEL DWSIKQARSI RTNLTASGPR PNPQGSYHYG RIKISRTLIL ESSAALVKRK QRYAINGVSF VPGDTPLKLA DYFKIKGVFK
401: MGSIPDKPRR GRGMRMETSV MGAHHRDFLE IIFQNREKIV QSYHLDGYSF WVVGTDRGTW SKASRREYNL RDAISRSTTQ VYPESWTAVY VALDNVGMWN
501: LRSEYWARQY LGQQFYLRVY SPTHSLRDEY LLPKNALLCG RASNKHTTP

Arabidopsis Description

sks9Putative pectinesterase [Source:UniProtKB/TrEMBL;Acc:Q8VYB3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.