Factsheet for Bra002825.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49392	Canola	extracellular	79.96	99.33
CDY68850	Canola	extracellular	54.15	99.01
Bra002824.1-P	Field mustard	cytosol	18.23	95.28
Bra038001.1-P	Field mustard	extracellular, vacuole	72.02	71.89
Bra001503.1-P	Field mustard	extracellular, plasma membrane	71.84	71.71
Bra030850.1-P	Field mustard	plasma membrane	70.76	71.4
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	70.76	70.76
Bra039389.1-P	Field mustard	plasma membrane	65.52	69.81
Bra001504.1-P	Field mustard	extracellular	69.31	69.69
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	69.31	69.57
VIT_00s1643g00010.t01	Wine grape	vacuole	68.05	68.55
VIT_00s1309g00010.t01	Wine grape	vacuole	68.05	68.55
GSMUA_Achr11P...	Banana	vacuole	64.8	68.12
GSMUA_Achr5P27810_001	Banana	extracellular	64.62	67.93
GSMUA_Achr8P01580_001	Banana	extracellular	62.82	67.44
Bra034680.1-P	Field mustard	extracellular, plasma membrane	66.61	66.73
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	7.58	66.67
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	62.27	65.84
Bra030849.1-P	Field mustard	cytosol	19.49	65.45
GSMUA_Achr11P...	Banana	extracellular	61.55	64.46
GSMUA_Achr8P09380_001	Banana	extracellular	61.01	64.38
GSMUA_AchrUn_...	Banana	extracellular	61.01	64.14
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	64.08	63.62
Solyc03g063150.2.1	Tomato	unclear	63.54	63.31
Solyc11g008860.1.1	Tomato	extracellular	63.36	63.24
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	63.36	63.13
GSMUA_Achr10P...	Banana	extracellular, golgi	64.26	63.12
PGSC0003DMT400016672	Potato	endoplasmic reticulum	62.64	62.64
PGSC0003DMT400060352	Potato	extracellular	62.09	62.32
Solyc05g055710.2.1	Tomato	extracellular	50.9	62.11
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	62.09	62.09
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	61.73	61.4
Solyc05g055720.1.1	Tomato	nucleus	9.93	61.11
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	61.19	60.86
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	60.83	60.5
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	61.91	60.49
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	60.83	60.29
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	60.65	60.0
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	60.11	59.57
TraesCS1B01G314600.1	Wheat	plasma membrane	60.11	59.57
TraesCS1D01G303600.1	Wheat	extracellular	60.11	59.57
EES01652	Sorghum	extracellular, golgi, vacuole	59.93	59.5
Zm00001d043090_P001	Maize	vacuole	59.75	59.43
EES19711	Sorghum	extracellular	59.93	59.39
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	59.21	58.89
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	60.29	58.6
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	58.66	58.45
Os01t0816700-01	Rice	plasma membrane	58.3	58.41
Zm00001d012524_P001	Maize	vacuole	58.84	58.32
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	58.3	58.3
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	58.48	58.27
GSMUA_Achr3P09610_001	Banana	plastid	62.27	56.46
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	62.27	55.2
Bra015781.1-P	Field mustard	extracellular	52.53	53.79
Bra008241.1-P	Field mustard	extracellular	52.89	53.47
Bra025818.1-P	Field mustard	extracellular	53.07	53.36
Bra037137.1-P	Field mustard	extracellular	51.26	52.5
Bra036800.1-P	Field mustard	extracellular	51.08	52.31
Bra034943.1-P	Field mustard	extracellular	50.9	52.03
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	50.9	51.74
Bra013582.1-P	Field mustard	extracellular	49.82	51.02
Bra017796.1-P	Field mustard	extracellular	49.46	50.74
Bra032154.1-P	Field mustard	extracellular	48.56	49.91
Bra022513.1-P	Field mustard	extracellular	46.75	47.18
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	41.52	46.65
Bra018479.1-P	Field mustard	plasma membrane	48.19	45.56
Bra000773.1-P	Field mustard	extracellular	47.65	45.13
Bra034914.1-P	Field mustard	extracellular	6.32	44.87
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	47.29	44.03
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	49.64	43.04
Zm00001d047156_P002	Maize	cytosol	15.52	42.57
Bra022551.1-P	Field mustard	plasma membrane	45.13	41.88
Bra029171.1-P	Field mustard	extracellular	43.68	41.37
Bra013877.1-P	Field mustard	plasma membrane	44.22	41.04
Zm00001d037444_P001	Maize	mitochondrion	18.41	38.06
Os05t0485800-00	Rice	plasma membrane	38.09	30.98
Zm00001d004806_P001	Maize	plastid	4.69	30.59
Bra011721.1-P	Field mustard	mitochondrion, plastid	48.19	22.51

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra002825	EnsemblPlants:Bra002825.1	EnsemblPlants:Bra002825.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_2_AO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR008972	UniProt:M4CF43	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF27	SUPFAM:SSF49503	SignalP:SignalP-noTM	UniParc:UPI0002544A17	SEG:seg	:

Description

AT1G55570 (E=9e-245) sks12 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase

Coordinates

chrA10:-:7334051..7336981

Molecular Weight (calculated)

62410.9 Da

IEP (calculated)

9.464

GRAVY (calculated)

-0.332

Length

554 amino acids

Sequence
(BLAST)

001: MVRKSVILGF LLTVLTTVIK AEDPYLFFTW KVTYGTISPF GIPQKAIMIN DKFPGPNLNT TTNNNIVINV INNLDEPFLF TWSGMQHRKN SWQDGMPGTT
101: CPIPPGKNFT YHFQAKDQIG SYFYYPSLGL QRAAGGFGGL RINSRALIPV PYPDPEDDYT VLIGDWYTKT HVALKDNLDS GRSIGRPEGV LINGKAGKPD
201: GTGEPIFTMK PGKTYKYRIC NVGLKMALNF RIQNHKIKLV ELEGSHTLQN LYDSLDLHVG QCFGVLVTAD QEPKDYYMVA STRFLKTVLT STALLRYEGG
301: KGAASPELPK PPVGWAWSLN QFRSFRWNLT ASAARPNPQG SYHYGKINIT RSIKLVNTVG KIEGKKLRYA LSGVSHVETE TPIKLAQYFG VADKVFKYDT
401: IKDEPTKVDT SNILVQPNVL NIEHRSFVEI VFENQERTTQ SWHLDGYSFF AVAVEPGKWT PAKRKNYNLL DAVYRHTIQV YPKCWGAILL TFDNCGMWNI
501: RSEILEKRYL GQQLYVNVGP PELSQRDEYS FPANGLRCGI IQGLPDPQPP RDSL

Best Arabidopsis Sequence Match ( AT1G55560.1 )
(BLAST)

001: MEGRLLTVLV CLVSTVAIVN AGDPYFFHTW NVTYGTASPL GVPQKVILIN GQFPGPNLNS TSNNNVVINV FNHLDEPFLL TWSGIQHRKN CWQDGVAGTS
101: CPIPAGQNFT YHFQPKDQIG SYFYYPTTSL HRFAGGFGGL RVNSRLLIPV PYADPEDDYT VLLGDWYTAG HTALKNFLDS GRTLGLPNGV LINGKSGKVG
201: GKNEPLFTMK PGKTYKYRLC NVGFKSTLNF RIQNHKMKLV EMEGSHVIQN DYDSLDVHVG QCFSVLVTAN QAAKDYYMVA STRFLKKELS TVGVIRYEGS
301: NVQASTELPK APVGWAWSLN QFRSFRWNLT SNAARPNPQG SYHYGKINIT RSIKLVNSKS VVDGKVRFGF NGVSHVDTET PLKLAEYFQM SEKVFKYNVI
401: KDEPAAKITA LTVQPNVLNI TFRTFVEIIF ENHEKTMQSF HLDGYSFFAV ASEPGRWTPE KRENYNLLDA VSRHTVQVYP KSWSAILLTF DNAGMWNIRS
501: ENLERKYLGE QLYVSVLSPE KSLRDEYNIP LNTNLCGIVK GLPLPAHYS

Arabidopsis Description

sks14Sks14 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.