Factsheet for Bra025818.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
vacuole 6
extracellular 6
endoplasmic reticulum 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31468	Canola	extracellular	94.92	94.92
AT1G21860.1	Thale cress	extracellular	76.59	78.44
AT1G21850.1	Thale cress	extracellular	78.22	78.22
Bra015781.1-P	Field mustard	extracellular	70.78	72.09
Bra008241.1-P	Field mustard	extracellular	70.42	70.8
KRH60965	Soybean	nucleus	69.87	70.38
KRH06000	Soybean	endoplasmic reticulum	68.42	69.69
KRH51639	Soybean	nucleus	68.97	69.47
KRH17495	Soybean	nucleus	68.6	69.1
Bra034943.1-P	Field mustard	extracellular	67.88	69.0
PGSC0003DMT400025805	Potato	extracellular	67.51	68.89
Solyc04g082140.2.1	Tomato	extracellular	67.15	68.52
VIT_18s0001g00470.t01	Wine grape	extracellular	66.42	67.65
Solyc12g094460.1.1	Tomato	extracellular	66.06	66.91
Solyc12g094470.1.1	Tomato	nucleus	65.88	66.85
PGSC0003DMT400075620	Potato	extracellular	65.7	66.67
PGSC0003DMT400075398	Potato	extracellular	65.52	66.36
Bra013582.1-P	Field mustard	extracellular	62.61	63.77
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	54.63	55.23
Bra022513.1-P	Field mustard	extracellular	54.63	54.83
Bra037137.1-P	Field mustard	extracellular	53.36	54.34
Bra030849.1-P	Field mustard	cytosol	16.15	53.94
Bra036800.1-P	Field mustard	extracellular	52.63	53.6
Bra001503.1-P	Field mustard	extracellular, plasma membrane	53.54	53.15
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	53.36	53.07
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	61.52	53.05
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.81	52.53
Bra038001.1-P	Field mustard	extracellular, vacuole	52.63	52.25
Bra001504.1-P	Field mustard	extracellular	52.09	52.09
Bra017796.1-P	Field mustard	extracellular	50.82	51.85
Bra030850.1-P	Field mustard	plasma membrane	51.54	51.73
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	51.54	51.45
Bra039389.1-P	Field mustard	plasma membrane	48.46	51.35
Bra032154.1-P	Field mustard	extracellular	49.55	50.65
Bra034680.1-P	Field mustard	extracellular, plasma membrane	50.64	50.45
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	44.83	50.1
Bra002824.1-P	Field mustard	cytosol	9.44	49.06
KRH57767	Soybean	cytosol, peroxisome	30.13	46.37
Bra000773.1-P	Field mustard	extracellular	47.19	44.44
Bra018479.1-P	Field mustard	plasma membrane	47.19	44.37
Bra022551.1-P	Field mustard	plasma membrane	47.55	43.89
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	47.01	43.53
Bra029171.1-P	Field mustard	extracellular	45.92	43.25
Bra013877.1-P	Field mustard	plasma membrane	46.1	42.55
Bra034914.1-P	Field mustard	extracellular	5.81	41.03
Bra011721.1-P	Field mustard	mitochondrion, plastid	48.28	22.43

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra025818	EnsemblPlants:Bra025818.1	EnsemblPlants:Bra025818.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR008972	UniProt:M4EAK9	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF90	SUPFAM:SSF49503	TMHMM:TMhelix	UniParc:UPI000253EF5F	SEG:seg	:

Description

AT1G21860 (E=4e-252) sks7 | sks7 (SKU5 Similar 7); copper ion binding / oxidoreductase

Coordinates

chrA06:-:8204046..8210184

Molecular Weight (calculated)

61145.9 Da

IEP (calculated)

8.556

GRAVY (calculated)

-0.191

Length

551 amino acids

Sequence
(BLAST)

001: MKNTKIAAKC KIAYAFVIGL SLLIATAAED PYIFYEWHVT YGTISPMGVQ QQGILINKMF PGPEILSVTN DNLIINVFNE LDEPFLISWA GIQNRKNSFQ
101: DGVCGTTCPI PPGKNYTYAL QVKDQIGSFY YFPSLGFHKA AGGFGGIRIS SRPMIPVPFP PPADDYTVLI GDWYKTDHKA LRAQLDNGGK LPPPDGILIN
201: GLSSGATLNI QPGNTYRLRI SNVGLQNSLN FRIQNHEMTL VEVEGTHTLQ NVYSSLDVHV GQSYSVLITA NQPSKDYYIV VSSRLTPTVL TTTGVLHYSN
301: SAEPVSGPIP AAPVPMSWSF NQARTIRTNL TASGPRPNPQ GTYHYGMVNV TRTIKLVSSV GQIEGKQRYS VNSASFTPSD TPLKLADYFK IDGVYKPGSI
401: SDQPPYAPTF PVTSVLQADY KAFVEIVFEN SEDIVQSWHF NGHSFFVVGM ELGKWRPGRR KVYNLNDAVS RCTIQVYPRS WTAIYVGLDN VGMWNLRSEL
501: WERQYLGQQL YVRVYTNSTS LRDEYQIPTN ALLCGRASGA HKELLLSGFE N

Best Arabidopsis Sequence Match ( AT1G21860.1 )
(BLAST)

001: MKVKSMNTRA MITTLLFLIS LAFAEDPYRF FEWHVTYGNI SPLGVAQQGI LINGKFPGPD IISITNDNLI INVFNHLDEP FLLSWNGIRN WKNSFQDGVY
101: GTMCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GGIRISSRAL IPVPFPTPAD DYTLLVGDWY KTNHKDLKAQ LDNGGKLPLP DGILINGRSS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHTMKLVEVE GRYTIQNLFS SLDVHVGQSY SVLITADQPA KDYYVVVSSR FTSKILTTTG VLHYSNSVAP
301: VSGPIPDGPI KLSWSFNQAR AIRTNLTASG PRPNPQGSYR YGVINITRTI RLANNLGHIE GKQRYAVNSA SFYPADTPLK LVDYFKIDGV YKPGSISDQP
401: TNGAIFPTTS VMQADFRAFV EVIFENSEDI VQSWHLDGYS FYVVGMELGK WSPASRKVYN LNDAILRCTI QVYPRSWTAI YIALDNVGMW NMRSEIWERQ
501: YLGQQFYMRV YTTSTSLRDE YLIPKNALLC GRASSSHR

Arabidopsis Description

sks7SKU5 similar 7 [Source:UniProtKB/TrEMBL;Acc:Q9SFF1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.