Factsheet for Bra012117.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01453	Canola	extracellular, golgi	98.53	98.53
Bra037137.1-P	Field mustard	extracellular	89.72	90.39
Bra036800.1-P	Field mustard	extracellular	86.42	87.06
AT5G66920.1	Thale cress	extracellular, plasma membrane, vacuole	86.79	86.63
VIT_00s0253g00040.t01	Wine grape	extracellular	72.66	73.88
KRH28523	Soybean	extracellular	72.11	73.18
KRH76937	Soybean	endoplasmic reticulum	71.19	71.85
KRH04707	Soybean	endoplasmic reticulum	71.19	71.72
KRH57764	Soybean	cytosol, extracellular, plastid	55.6	71.29
Solyc02g065170.2.1	Tomato	nucleus	69.54	70.32
Solyc02g090360.2.1	Tomato	extracellular	69.17	70.07
PGSC0003DMT400002004	Potato	extracellular	69.17	69.94
PGSC0003DMT400025973	Potato	extracellular	69.54	66.61
GSMUA_Achr6P34670_001	Banana	extracellular	62.94	64.47
GSMUA_Achr10P...	Banana	extracellular	63.67	63.32
Os07t0119400-01	Rice	extracellular	60.55	60.55
HORVU2Hr1G062590.3	Barley	extracellular	59.27	59.81
TraesCS2D01G259100.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	59.63	59.74
Bra017796.1-P	Field mustard	extracellular	58.9	59.44
TraesCS2B01G277200.1	Wheat	extracellular	59.45	59.23
Bra032154.1-P	Field mustard	extracellular	58.53	59.18
TraesCS2A01G264900.1	Wheat	extracellular	58.9	59.01
OQU88350	Sorghum	extracellular	58.53	57.69
Bra015781.1-P	Field mustard	extracellular	57.25	57.67
Bra013582.1-P	Field mustard	extracellular	56.51	56.93
Bra008241.1-P	Field mustard	extracellular	56.88	56.57
Bra034943.1-P	Field mustard	extracellular	56.15	56.46
Bra030849.1-P	Field mustard	cytosol	16.7	55.15
Bra025818.1-P	Field mustard	extracellular	55.23	54.63
Zm00001d018696_P001	Maize	extracellular	57.61	53.95
Bra039389.1-P	Field mustard	plasma membrane	51.38	53.85
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	54.13	53.44
Bra030850.1-P	Field mustard	plasma membrane	53.76	53.37
Bra001504.1-P	Field mustard	extracellular	53.95	53.36
Bra038001.1-P	Field mustard	extracellular, vacuole	53.21	52.25
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.48	51.62
Bra001503.1-P	Field mustard	extracellular, plasma membrane	52.29	51.35
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	51.74	50.9
Bra022513.1-P	Field mustard	extracellular	51.01	50.64
Bra034680.1-P	Field mustard	extracellular, plasma membrane	48.99	48.28
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	42.39	46.86
Bra002824.1-P	Field mustard	cytosol	8.99	46.23
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	53.58	45.7
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	48.99	44.87
Bra018479.1-P	Field mustard	plasma membrane	47.52	44.2
Bra000773.1-P	Field mustard	extracellular	47.16	43.93
Bra034914.1-P	Field mustard	extracellular	6.24	43.59
Bra029171.1-P	Field mustard	extracellular	44.95	41.88
Bra022551.1-P	Field mustard	plasma membrane	45.32	41.37
Bra013877.1-P	Field mustard	plasma membrane	44.59	40.7
Bra011721.1-P	Field mustard	mitochondrion, plastid	56.51	25.97

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra012117	EnsemblPlants:Bra012117.1	EnsemblPlants:Bra012117.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR008972	UniProt:M4D6K8	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF26	SUPFAM:SSF49503	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0002541769	SEG:seg

Description

AT5G66920 (E=6e-241) sks17 | sks17 (SKU5 Similar 17); copper ion binding / oxidoreductase

Coordinates

chrA07:-:9909200..9911492

Molecular Weight (calculated)

60793.5 Da

IEP (calculated)

9.470

GRAVY (calculated)

-0.184

Length

545 amino acids

Sequence
(BLAST)

001: MKMAFRTRLS LLRLLLLVAL ALLSILVSVK GESPYKFYTW TVTYGVISPL GVPQQVILIN GQFPGPKLEV VTNDNIILNL INKLDQPFLL TWNGIKQRKN
101: SWQDGVLGTN CPIPPNSNFT YKFQTKDQIG TYNYFPSTAF HKAAGGFGAI NIYARPRIPI PYPLPVADFT LLIGDWFKTN HKTLQQRLDS GGVLPSPDGM
201: LINGQTQTTF TGDQGKTYML RISNVGSSST FNFRIQGHAM QVVEVEGSHV LQNVYESLDV HVGQSLSVLV TLNQPSKNYY IVASTRYTTS KLSVTGLLRY
301: SNSGVPASGD MPPPPPEDLD WSLNQARSFR WNLTANAARP NPQGSFHYGT ITPTKSFVFS NSAPLFNGKQ RYAVNGVSYV NSDTPLKLAD HFNIPGVFST
401: NAIQSVPSSS PVTVATSVVQ ASLHDFLEVV FQNNEESMQS WHLDGYDFWV VGFGSGQWTP EQRPLYNLVD ALTRHTTQVY PKSWTAILVS LDNQGMWNMR
501: SAIWERQYLG QQFYLKVWDP VQSLANEYNP PDNLLLCGKA IGRRV

Best Arabidopsis Sequence Match ( AT5G66920.1 )
(BLAST)

001: MKMASRKTTS LLNHLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK
101: NSWQDGVLGT NCPIQPNSNF TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPLPTADF TLLVGDWFKT NHKTLQQRLD SGGVLPFPDG
201: MLINGQTQST FSGDQGKTYM LRISNVGLSS TFNFRIQGHT MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YIVASTRFIR SKLSVMGLLR
301: YSNSRVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG MISPTKTFVF SNSAPLINGK QRYAVNGVSY VKSETPLKLA DHFGISGVFS
401: TNAIQSVPSN SPPTVATSVV QTSHHDFLEI VFQNNEKSMQ SWHLDGYDFW VVGFGSGQWT PAKRSLHNLV DALTRHTTQV YPESWTTILV SLDNQGMWNM
501: RSAIWERQYS GQQFYLKVWN SVQSLANEYN PPDNLQLCGK AVGRHV

Arabidopsis Description

sks17Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.