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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012117.1-P Field mustard extracellular, golgi, vacuole 98.53 98.53
CDY12788 Canola extracellular 94.31 94.66
CDY18626 Canola extracellular 89.36 90.02
CDX81353 Canola extracellular 89.17 89.83
CDY68812 Canola cytosol, peroxisome 71.56 87.44
CDY43557 Canola extracellular 86.42 87.06
AT5G66920.1 Thale cress extracellular, plasma membrane, vacuole 86.79 86.63
VIT_00s0253g00040.t01 Wine grape extracellular 72.29 73.51
KRH28523 Soybean extracellular 72.29 73.37
KRH04707 Soybean endoplasmic reticulum 71.56 72.09
KRH76937 Soybean endoplasmic reticulum 71.38 72.04
KRH57764 Soybean cytosol, extracellular, plastid 55.78 71.53
Solyc02g065170.2.1 Tomato nucleus 69.17 69.94
Solyc02g090360.2.1 Tomato extracellular 68.99 69.89
PGSC0003DMT400002004 Potato extracellular 68.81 69.57
CDY68876 Canola cytosol 13.76 66.96
PGSC0003DMT400025973 Potato extracellular 69.36 66.43
GSMUA_Achr6P34670_001 Banana extracellular 63.12 64.66
GSMUA_Achr10P... Banana extracellular 63.67 63.32
Os07t0119400-01 Rice extracellular 60.37 60.37
CDX72617 Canola extracellular 59.45 59.89
CDY42716 Canola extracellular 59.08 59.63
CDX69261 Canola extracellular 57.61 59.58
HORVU2Hr1G062590.3 Barley extracellular 58.9 59.44
TraesCS2D01G259100.1 Wheat endoplasmic reticulum, extracellular, mitochondrion 59.08 59.19
CDY38959 Canola extracellular 58.53 59.18
TraesCS2B01G277200.1 Wheat extracellular 58.9 58.68
TraesCS2A01G264900.1 Wheat extracellular 58.53 58.64
CDX75611 Canola extracellular 57.8 58.23
CDX82897 Canola extracellular 57.43 57.86
CDX79120 Canola extracellular 57.43 57.86
CDX87633 Canola extracellular 57.25 57.67
OQU88350 Sorghum extracellular 58.35 57.5
CDX73238 Canola extracellular 57.06 57.49
CDX89586 Canola mitochondrion 23.3 57.21
CDY67479 Canola extracellular 56.51 56.93
CDY35790 Canola extracellular 56.51 56.83
CDY68834 Canola extracellular, vacuole 57.06 56.65
CDY55201 Canola extracellular 56.7 56.28
CDY31468 Canola extracellular 55.6 54.99
CDY68850 Canola extracellular 29.91 53.8
Zm00001d018696_P001 Maize extracellular 57.25 53.61
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 53.58 53.19
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 53.58 53.19
CDX75708 Canola extracellular 53.76 53.18
CDY43352 Canola extracellular, plasma membrane 49.54 53.05
CDX82540 Canola extracellular 53.58 52.99
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 53.58 52.9
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 53.58 52.9
CDY50029 Canola extracellular 52.29 52.78
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 53.21 52.73
CDY43353 Canola extracellular, plasma membrane, vacuole 52.66 51.81
CDY49392 Canola extracellular 42.2 51.57
CDX82541 Canola extracellular, plasma membrane 52.48 51.53
CDY24189 Canola extracellular, plasma membrane, vacuole 52.29 51.44
CDY23596 Canola extracellular, plasma membrane 52.29 51.35
CDX75707 Canola extracellular, plasma membrane, vacuole 52.29 51.35
CDY43995 Canola extracellular, plasma membrane 52.29 51.35
CDX97352 Canola mitochondrion 45.87 51.23
CDY54363 Canola extracellular 50.64 50.64
CDX89588 Canola cytosol 25.14 49.82
CDX91548 Canola cytosol 44.77 49.09
CDY64276 Canola cytosol 53.39 47.39
CDY32795 Canola cytosol 8.81 46.15
CDY29530 Canola plastid 51.01 45.87
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 53.58 45.7
CDY13534 Canola extracellular 45.69 45.69
CDY39058 Canola extracellular 45.5 45.5
CDY48757 Canola extracellular, plasma membrane, vacuole 49.36 45.21
CDY05676 Canola extracellular, plasma membrane, vacuole 49.17 44.97
CDX97339 Canola plasma membrane 47.71 44.37
CDX90830 Canola extracellular 47.34 44.1
CDY04429 Canola plasma membrane 47.34 44.03
CDY16369 Canola mitochondrion 37.8 43.46
CDY48940 Canola extracellular 6.06 42.31
CDY64023 Canola extracellular 45.14 42.05
CDY38866 Canola extracellular 45.14 42.05
CDY46940 Canola plasma membrane 45.5 41.54
CDX91586 Canola extracellular 44.77 40.87
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 44.77 40.73
CDX99917 Canola plasma membrane 44.22 40.37
CDX89433 Canola plasma membrane 44.04 40.13
CDY00478 Canola cytosol 25.32 35.75
CDX76855 Canola cytoskeleton, cytosol, extracellular 15.05 32.93
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078EPK8EnsemblPlants:CDY01453ProteinID:CDY01453ProteinID:CDY01453.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CupredoxinGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00112459001InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732
PANTHER:PTHR11709PANTHER:PTHR11709:SF26SUPFAM:SSF49503SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EEB077
SEG:seg:::::
Description
BnaA07g12260D
Coordinates
chrLK031926:-:1126774..1129352
Molecular Weight (calculated)
60846.6 Da
IEP (calculated)
9.372
GRAVY (calculated)
-0.193
Length
545 amino acids
Sequence
(BLAST)
001: MKMAFRTRLS LLRLLLLVAL ALLSILVSVK GESPYKFYTW TVTYGVISPL GVPQQVILIN GQFPGPKLEV VTNDNIILNL INKLDQPFLL TWNGIKQRKN
101: SWQDGVLGTN CPIPPNSNFT YKFQTKDQIG TYNYFPSTAF HKAAGGFGAI NIYARPRIPI PYPLPVADFT LLIGDWFKTN HKTLQERLDS GGVLPSPDGM
201: LINGQTQTTF TGDQGKTYML RISNVGSSST FNFRIQGHTM QVVEVEGSHV LQNVYESLDV HVGQSLSVLV TLNQPSKDYY IVATSRYTTS KLSVTGLLRY
301: SNSGVPASGD MPPPPPEDLD WSLNQARSFR WNLTANAARP NPQGSFHYGT ITPTKSFVFS NSAPLINGKQ RYAVNGVSYV NSDTPLKLAD HFNIPGVFST
401: NAIQRVPSSS PVTVATSVVQ ASLHDFLEVV FQNNEESMQS WHLDGYDFWV VGFGSGQWTP EQRPLYNLVD ALTRHTTQVY PKSWTAILVS LDNQGMWNMR
501: SAIWERQYLG QQFYLKVWDP VQSLANEYNP PDNLLLCGKA VGRRV
Best Arabidopsis Sequence Match ( AT5G66920.1 )
(BLAST)
001: MKMASRKTTS LLNHLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK
101: NSWQDGVLGT NCPIQPNSNF TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPLPTADF TLLVGDWFKT NHKTLQQRLD SGGVLPFPDG
201: MLINGQTQST FSGDQGKTYM LRISNVGLSS TFNFRIQGHT MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YIVASTRFIR SKLSVMGLLR
301: YSNSRVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG MISPTKTFVF SNSAPLINGK QRYAVNGVSY VKSETPLKLA DHFGISGVFS
401: TNAIQSVPSN SPPTVATSVV QTSHHDFLEI VFQNNEKSMQ SWHLDGYDFW VVGFGSGQWT PAKRSLHNLV DALTRHTTQV YPESWTTILV SLDNQGMWNM
501: RSAIWERQYS GQQFYLKVWN SVQSLANEYN PPDNLQLCGK AVGRHV
Arabidopsis Description
sks17Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.