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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G048550.1 Barley cytosol, extracellular 36.61 65.08
Bra030849.1-P Field mustard cytosol 57.14 38.79
CDY48940 Canola extracellular 25.0 35.9
CDY68850 Canola extracellular 72.32 26.73
CDX89588 Canola cytosol 61.61 25.09
CDY50029 Canola extracellular 95.54 19.81
CDY54363 Canola extracellular 95.54 19.63
AT1G55570.1 Thale cress extracellular, plasma membrane 95.54 19.28
Solyc05g055710.2.1 Tomato extracellular 76.79 18.94
CDY43353 Canola extracellular, plasma membrane, vacuole 91.96 18.59
CDY24189 Canola extracellular, plasma membrane, vacuole 91.07 18.41
CDX82541 Canola extracellular, plasma membrane 90.18 18.2
CDX75707 Canola extracellular, plasma membrane, vacuole 89.29 18.02
CDY23596 Canola extracellular, plasma membrane 89.29 18.02
CDY43995 Canola extracellular, plasma membrane 89.29 18.02
CDY49392 Canola extracellular 71.43 17.94
CDY43352 Canola extracellular, plasma membrane 80.36 17.68
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 84.82 17.3
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 84.82 17.3
CDX75708 Canola extracellular 83.04 16.88
GSMUA_Achr9P04930_001 Banana endoplasmic reticulum, extracellular, plasma membrane 78.57 16.79
CDX82540 Canola extracellular 82.14 16.7
GSMUA_Achr8P01580_001 Banana extracellular 76.79 16.67
GSMUA_Achr8P09380_001 Banana extracellular 76.79 16.38
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 80.36 16.36
GSMUA_Achr11P... Banana vacuole 76.79 16.32
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 80.36 16.3
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 80.36 16.3
GSMUA_Achr5P27810_001 Banana extracellular 75.89 16.13
PGSC0003DMT400016672 Potato endoplasmic reticulum 79.46 16.07
Solyc01g056310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 79.46 16.07
PGSC0003DMT400060352 Potato extracellular 78.57 15.94
GSMUA_AchrUn_... Banana extracellular 75.0 15.94
GSMUA_Achr11P... Banana extracellular 74.11 15.69
Solyc11g008860.1.1 Tomato extracellular 75.0 15.14
PGSC0003DMT400002554 Potato endoplasmic reticulum, extracellular, golgi 75.0 15.11
Solyc03g063150.2.1 Tomato unclear 74.11 14.93
PGSC0003DMT400041845 Potato extracellular, plasma membrane, vacuole 74.11 14.87
PGSC0003DMT400010905 Potato extracellular, plasma membrane 75.0 14.81
GSMUA_Achr9P16870_001 Banana extracellular, plasma membrane, vacuole 73.21 14.72
PGSC0003DMT400082031 Potato extracellular, plasma membrane, vacuole 73.21 14.72
Solyc01g005510.2.1 Tomato extracellular, plasma membrane, vacuole 73.21 14.72
GSMUA_Achr10P... Banana extracellular, golgi 74.11 14.72
VIT_00s1309g00010.t01 Wine grape vacuole 71.43 14.55
VIT_00s1643g00010.t01 Wine grape vacuole 71.43 14.55
GSMUA_Achr3P09610_001 Banana plastid 75.89 13.91
CDY43557 Canola extracellular 66.96 13.86
CDY12788 Canola extracellular 66.96 13.81
CDY01453 Canola extracellular, golgi 66.96 13.76
CDX81353 Canola extracellular 66.07 13.68
CDY18626 Canola extracellular 66.07 13.68
CDX69261 Canola extracellular 64.29 13.66
CDY42716 Canola extracellular 65.18 13.52
GSMUA_Achr5P07530_001 Banana extracellular, golgi, vacuole 75.0 13.44
CDX72617 Canola extracellular 64.29 13.31
CDX75611 Canola extracellular 64.29 13.31
HORVU3Hr1G080360.1 Barley extracellular, golgi, vacuole 66.07 13.29
Zm00001d043090_P001 Maize vacuole 66.07 13.29
Zm00001d038521_P001 Maize extracellular, plasma membrane, vacuole 66.07 13.24
TraesCS3A01G340200.1 Wheat extracellular, golgi, vacuole 65.18 13.18
CDY38959 Canola extracellular 63.39 13.17
CDX73238 Canola extracellular 63.39 13.12
CDX87633 Canola extracellular 63.39 13.12
Zm00001d012524_P001 Maize vacuole 65.18 13.06
Zm00001d010630_P003 Maize extracellular, golgi, vacuole 66.07 12.98
TraesCS3B01G371800.1 Wheat extracellular, golgi, vacuole 64.29 12.95
TraesCS3D01G333700.1 Wheat extracellular, golgi, vacuole 64.29 12.95
CDY48757 Canola extracellular, plasma membrane, vacuole 68.75 12.94
CDY67479 Canola extracellular 62.5 12.94
CDY05676 Canola extracellular, plasma membrane, vacuole 68.75 12.92
CDY35790 Canola extracellular 62.5 12.92
EES01652 Sorghum extracellular, golgi, vacuole 64.29 12.9
CDY31468 Canola extracellular 63.39 12.89
EES19711 Sorghum extracellular 64.29 12.88
TraesCS1B01G314600.1 Wheat plasma membrane 64.29 12.88
HORVU1Hr1G069130.1 Barley extracellular, golgi, plasma membrane 64.29 12.86
CDX79120 Canola extracellular 61.61 12.75
CDX82897 Canola extracellular 61.61 12.75
CDY55201 Canola extracellular 62.5 12.75
CDY68834 Canola extracellular, vacuole 62.5 12.75
TraesCS1D01G303600.1 Wheat extracellular 63.39 12.7
TraesCS1A01G304100.1 Wheat extracellular, golgi, plasma membrane 62.5 12.52
CDY46940 Canola plasma membrane 65.18 12.23
CDY38866 Canola extracellular 63.39 12.14
CDY64023 Canola extracellular 63.39 12.14
CDX91586 Canola extracellular 64.29 12.06
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 64.29 12.02
Os01t0816700-01 Rice plasma membrane 58.93 11.93
CDY13534 Canola extracellular 58.04 11.93
CDY39058 Canola extracellular 58.04 11.93
CDX89433 Canola plasma membrane 63.39 11.87
CDY64276 Canola cytosol 64.29 11.73
CDX90830 Canola extracellular 60.71 11.62
CDX97339 Canola plasma membrane 60.71 11.6
CDY04429 Canola plasma membrane 60.71 11.6
CDX99917 Canola plasma membrane 61.61 11.56
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 65.18 11.42
Os05t0485800-00 Rice plasma membrane 66.96 11.01
CDX97352 Canola mitochondrion 43.75 10.04
CDX91548 Canola cytosol 31.25 7.04
CDY29530 Canola plastid 36.61 6.77
CDY68812 Canola cytosol, peroxisome 25.89 6.5
CDX76855 Canola cytoskeleton, cytosol, extracellular 10.71 4.82
Zm00001d047156_P002 Maize cytosol 8.04 4.46
Zm00001d037444_P001 Maize mitochondrion 9.82 4.1
Zm00001d004806_P001 Maize plastid 2.68 3.53
CDY16369 Canola mitochondrion 2.68 0.63
CDX89586 Canola mitochondrion 0.0 0.0
CDY00478 Canola cytosol 0.0 0.0
CDY32795 Canola cytosol 0.0 0.0
Solyc05g055720.1.1 Tomato nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:CDY68876EnsemblPlantsGene:GSBRNA2T00080943001Gene3D:2.60.40.420GO:A0A078JTB9GO:GO:0003674GO:GO:0005488
GO:GO:0005507InterPro:Cu-oxidase_3InterPro:CupredoxinInterPro:IPR008972PANTHER:PTHR11709PANTHER:PTHR11709:SF27
PFAM:PF07732ProteinID:CDY68876ProteinID:CDY68876.1SEG:segSUPFAM:SSF49503UniParc:UPI0004EF1A87
UniProt:A0A078JTB9MapMan:50.1.10::::
Description
BnaAnng28640DBnaAnng28640D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JTB9]
Coordinates
chrLK038178:+:3369..4882
Molecular Weight (calculated)
12616.7 Da
IEP (calculated)
6.500
GRAVY (calculated)
-0.432
Length
112 amino acids
Sequence
(BLAST)
001: MVQAEDPYFH HVWNVTYGSA SPLGVPQQVI LINGQFPGPN LNSTSNNNVI VNVFNNLDEP FLITWNGIQH RKNSWQDGTA GTMCPIPPGK NFTYHFQPKD
101: QIGSYFYYPT TA
Best Arabidopsis Sequence Match ( AT1G55560.1 )
(BLAST)
001: MEGRLLTVLV CLVSTVAIVN AGDPYFFHTW NVTYGTASPL GVPQKVILIN GQFPGPNLNS TSNNNVVINV FNHLDEPFLL TWSGIQHRKN CWQDGVAGTS
101: CPIPAGQNFT YHFQPKDQIG SYFYYPTTSL HRFAGGFGGL RVNSRLLIPV PYADPEDDYT VLLGDWYTAG HTALKNFLDS GRTLGLPNGV LINGKSGKVG
201: GKNEPLFTMK PGKTYKYRLC NVGFKSTLNF RIQNHKMKLV EMEGSHVIQN DYDSLDVHVG QCFSVLVTAN QAAKDYYMVA STRFLKKELS TVGVIRYEGS
301: NVQASTELPK APVGWAWSLN QFRSFRWNLT SNAARPNPQG SYHYGKINIT RSIKLVNSKS VVDGKVRFGF NGVSHVDTET PLKLAEYFQM SEKVFKYNVI
401: KDEPAAKITA LTVQPNVLNI TFRTFVEIIF ENHEKTMQSF HLDGYSFFAV ASEPGRWTPE KRENYNLLDA VSRHTVQVYP KSWSAILLTF DNAGMWNIRS
501: ENLERKYLGE QLYVSVLSPE KSLRDEYNIP LNTNLCGIVK GLPLPAHYS
Arabidopsis Description
sks14Sks14 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.