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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037137.1-P Field mustard extracellular 98.71 98.71
CDY18626 Canola extracellular 98.52 98.52
CDY68812 Canola cytosol, peroxisome 74.68 90.58
CDY43557 Canola extracellular 89.65 89.65
CDY01453 Canola extracellular, golgi 89.83 89.17
AT5G66920.1 Thale cress extracellular, plasma membrane, vacuole 89.46 88.64
CDY12788 Canola extracellular 87.99 87.66
VIT_00s0253g00040.t01 Wine grape extracellular 74.12 74.81
KRH57764 Soybean cytosol, extracellular, plastid 57.86 73.65
KRH04707 Soybean endoplasmic reticulum 73.57 73.57
KRH28523 Soybean extracellular 72.83 73.37
KRH76937 Soybean endoplasmic reticulum 72.46 72.59
Solyc02g090360.2.1 Tomato extracellular 71.16 71.56
Solyc02g065170.2.1 Tomato nucleus 71.16 71.43
PGSC0003DMT400002004 Potato extracellular 70.79 71.06
PGSC0003DMT400025973 Potato extracellular 71.35 67.84
CDY68876 Canola cytosol 13.68 66.07
GSMUA_Achr6P34670_001 Banana extracellular 64.88 65.98
GSMUA_Achr10P... Banana extracellular 64.88 64.05
Os07t0119400-01 Rice extracellular 61.0 60.55
HORVU2Hr1G062590.3 Barley extracellular 59.89 60.0
TraesCS2D01G259100.1 Wheat endoplasmic reticulum, extracellular, mitochondrion 60.07 59.74
CDX72617 Canola extracellular 59.7 59.7
CDX69261 Canola extracellular 58.04 59.58
CDY42716 Canola extracellular 59.33 59.44
TraesCS2B01G277200.1 Wheat extracellular 60.07 59.41
TraesCS2A01G264900.1 Wheat extracellular 59.7 59.38
CDY38959 Canola extracellular 58.96 59.18
CDX75611 Canola extracellular 58.41 58.41
CDX82897 Canola extracellular 58.41 58.41
CDX79120 Canola extracellular 58.41 58.41
OQU88350 Sorghum extracellular 58.96 57.69
CDX89586 Canola mitochondrion 23.48 57.21
CDX87633 Canola extracellular 56.93 56.93
CDX73238 Canola extracellular 56.75 56.75
CDY67479 Canola extracellular 56.01 56.01
CDY35790 Canola extracellular 56.01 55.9
CDY68834 Canola extracellular, vacuole 56.56 55.74
CDY55201 Canola extracellular 56.19 55.37
Zm00001d018696_P001 Maize extracellular 58.78 54.64
CDY68850 Canola extracellular 30.31 54.13
CDY31468 Canola extracellular 54.71 53.72
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 54.34 53.55
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 54.34 53.55
CDX75708 Canola extracellular 53.97 52.99
CDY50029 Canola extracellular 52.87 52.96
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 53.97 52.9
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 53.97 52.9
CDY43352 Canola extracellular, plasma membrane 49.72 52.85
CDX82540 Canola extracellular 53.79 52.81
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 53.6 52.73
CDX82541 Canola extracellular, plasma membrane 53.05 51.71
CDY49392 Canola extracellular 42.51 51.57
CDY43353 Canola extracellular, plasma membrane, vacuole 52.68 51.44
CDX97352 Canola mitochondrion 46.4 51.43
CDY24189 Canola extracellular, plasma membrane, vacuole 52.5 51.26
CDY43995 Canola extracellular, plasma membrane 52.5 51.17
CDY23596 Canola extracellular, plasma membrane 52.5 51.17
CDX75707 Canola extracellular, plasma membrane, vacuole 52.5 51.17
CDY54363 Canola extracellular 51.2 50.83
CDX89588 Canola cytosol 25.32 49.82
CDX91548 Canola cytosol 45.29 49.3
CDY64276 Canola cytosol 55.08 48.53
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 55.45 46.95
CDY32795 Canola cytosol 8.87 46.15
CDY13534 Canola extracellular 46.21 45.87
CDY39058 Canola extracellular 46.03 45.69
CDY48757 Canola extracellular, plasma membrane, vacuole 49.91 45.38
CDY05676 Canola extracellular, plasma membrane, vacuole 49.72 45.13
CDY29530 Canola plastid 49.54 44.22
CDY16369 Canola mitochondrion 38.26 43.67
CDY48940 Canola extracellular 6.28 43.59
CDX97339 Canola plasma membrane 47.13 43.52
CDX90830 Canola extracellular 46.95 43.42
CDY04429 Canola plasma membrane 46.95 43.34
CDY64023 Canola extracellular 45.84 42.39
CDY38866 Canola extracellular 45.84 42.39
CDY46940 Canola plasma membrane 46.21 41.88
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 45.84 41.4
CDX91586 Canola extracellular 45.66 41.37
CDX89433 Canola plasma membrane 44.92 40.64
CDX99917 Canola plasma membrane 44.55 40.37
CDY00478 Canola cytosol 25.88 36.27
CDX76855 Canola cytoskeleton, cytosol, extracellular 14.79 32.13
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078D1Z1EnsemblPlants:CDX81353ProteinID:CDX81353ProteinID:CDX81353.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CupredoxinGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00134907001InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732
PANTHER:PTHR11709PANTHER:PTHR11709:SF26SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDADBB
SEG:seg:::::
Description
BnaC09g07640D
Coordinates
chrLK031824:-:1157652..1160250
Molecular Weight (calculated)
60408.1 Da
IEP (calculated)
9.625
GRAVY (calculated)
-0.162
Length
541 amino acids
Sequence
(BLAST)
001: MAFRTGLSLL HLLVALALLS SLVIVKGESP YKFYTWTVTY GIIYPLGVPQ QVILINGQFP GPKLDVVTND NIILNLINKL DQPFLLTWNG IKQRKNSWQD
101: GVLGTNCPIP PNSNFTYKFQ TKDQIGTYNY FPSTAFHKAA GGFGAINVYA RPRIPIPYPL PVEDFTLLIS DWFKTNHKTL QQRLDSGGVL PFPDGVLING
201: QTQTTFTGDQ GKTYMFRISN VGSSSTFNFR IQGHTMKVVE VEGSHVMQTD YDSLDVHVGQ SLSLLVTLNQ SPKDYYIVAS TRFVRSNLSV TALLRYSNSG
301: VPASGDMPPL PPGELVWSMR QARTFRWNLT ANAARPNPQG SFHYGKINTT KSFVFSNSAP LINGKQRYAV NGVSYVNSDT PLKLADHFNI PGVFSTSAIQ
401: SVPSNSPATV ATSVVKASLH DFLEIVFQNN EKAVQSWHLD GYDFWVVGFG SGQWTPAKRQ LYNLVDALTR HTTQVYPNSW TAILVSLDNQ GMWNMRSAIW
501: ERQYLGQQFY LKVWDPVQSL ANEYNPPDNL LLCGKAIGRH L
Best Arabidopsis Sequence Match ( AT5G66920.1 )
(BLAST)
001: MKMASRKTTS LLNHLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK
101: NSWQDGVLGT NCPIQPNSNF TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPLPTADF TLLVGDWFKT NHKTLQQRLD SGGVLPFPDG
201: MLINGQTQST FSGDQGKTYM LRISNVGLSS TFNFRIQGHT MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YIVASTRFIR SKLSVMGLLR
301: YSNSRVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG MISPTKTFVF SNSAPLINGK QRYAVNGVSY VKSETPLKLA DHFGISGVFS
401: TNAIQSVPSN SPPTVATSVV QTSHHDFLEI VFQNNEKSMQ SWHLDGYDFW VVGFGSGQWT PAKRSLHNLV DALTRHTTQV YPESWTTILV SLDNQGMWNM
501: RSAIWERQYS GQQFYLKVWN SVQSLANEYN PPDNLQLCGK AVGRHV
Arabidopsis Description
sks17Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.