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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31468 Canola extracellular 75.58 83.12
AT1G21860.1 Thale cress extracellular 63.2 71.19
AT1G21850.1 Thale cress extracellular 64.52 70.96
CDX73238 Canola extracellular 59.08 66.17
CDX87633 Canola extracellular 59.08 66.17
CDY68834 Canola extracellular, vacuole 58.91 65.03
CDY55201 Canola extracellular 58.58 64.66
KRH60965 Soybean nucleus 58.25 64.53
KRH06000 Soybean endoplasmic reticulum 57.1 63.96
CDY67479 Canola extracellular 56.93 63.77
CDY35790 Canola extracellular 56.93 63.65
KRH51639 Soybean nucleus 57.43 63.62
KRH17495 Soybean nucleus 56.93 63.07
PGSC0003DMT400025805 Potato extracellular 55.78 62.59
VIT_18s0001g00470.t01 Wine grape extracellular 55.61 62.29
Solyc04g082140.2.1 Tomato extracellular 55.12 61.85
Solyc12g094470.1.1 Tomato nucleus 54.79 61.14
Solyc12g094460.1.1 Tomato extracellular 54.79 61.03
PGSC0003DMT400075398 Potato extracellular 54.29 60.48
PGSC0003DMT400075620 Potato extracellular 54.13 60.41
CDX82897 Canola extracellular 52.31 58.6
CDX79120 Canola extracellular 52.31 58.6
CDY68812 Canola cytosol, peroxisome 40.59 55.16
CDX91548 Canola cytosol 43.73 53.32
CDX97352 Canola mitochondrion 41.75 51.84
CDY01453 Canola extracellular, golgi 45.87 51.01
CDY12788 Canola extracellular 44.72 49.91
CDY18626 Canola extracellular 44.55 49.91
CDY64276 Canola cytosol 50.33 49.67
CDX81353 Canola extracellular 44.22 49.54
CDX89586 Canola mitochondrion 17.99 49.1
CDY32795 Canola cytosol 8.42 49.04
CDY43557 Canola extracellular 43.4 48.61
CDX82541 Canola extracellular, plasma membrane 44.22 48.29
CDY23596 Canola extracellular, plasma membrane 44.06 48.11
CDY43995 Canola extracellular, plasma membrane 44.06 48.11
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 50.66 48.04
CDX75707 Canola extracellular, plasma membrane, vacuole 43.89 47.93
CDY24189 Canola extracellular, plasma membrane, vacuole 43.73 47.83
CDY16369 Canola mitochondrion 37.29 47.68
CDY43353 Canola extracellular, plasma membrane, vacuole 43.56 47.65
CDY50029 Canola extracellular 42.24 47.41
CDY49392 Canola extracellular 34.82 47.31
CDY68850 Canola extracellular 23.6 47.19
CDX82540 Canola extracellular 42.74 47.01
CDX75708 Canola extracellular 42.74 47.01
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 42.41 46.81
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 42.08 46.45
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 42.24 46.38
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 42.24 46.38
KRH57767 Soybean cytosol, peroxisome 27.39 46.37
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 41.91 46.18
CDY42716 Canola extracellular 40.92 45.93
CDY43352 Canola extracellular, plasma membrane 38.45 45.78
CDY54363 Canola extracellular 41.09 45.69
CDY38959 Canola extracellular 40.59 45.64
CDX72617 Canola extracellular 40.59 45.47
CDX69261 Canola extracellular 39.44 45.35
CDX75611 Canola extracellular 39.27 43.99
CDY13534 Canola extracellular 39.44 43.85
CDY39058 Canola extracellular 39.44 43.85
CDX90830 Canola extracellular 39.11 40.51
CDY48757 Canola extracellular, plasma membrane, vacuole 39.77 40.5
CDX97339 Canola plasma membrane 38.94 40.27
CDY04429 Canola plasma membrane 38.78 40.1
CDY05676 Canola extracellular, plasma membrane, vacuole 39.44 40.1
CDY46940 Canola plasma membrane 39.27 39.87
CDX99917 Canola plasma membrane 39.11 39.7
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 39.11 39.57
CDX91586 Canola extracellular 38.78 39.36
CDY38866 Canola extracellular 37.95 39.32
CDX89433 Canola plasma membrane 38.78 39.3
CDY64023 Canola extracellular 37.62 38.97
CDY00478 Canola cytosol 23.43 36.79
CDY68876 Canola cytosol 6.77 36.61
CDY48940 Canola extracellular 4.62 35.9
CDX89588 Canola cytosol 14.85 32.73
CDX76855 Canola cytoskeleton, cytosol, extracellular 12.87 31.33
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078GSV6UniProt:A0A078GSV6EnsemblPlants:CDY29530ProteinID:CDY29530
ProteinID:CDY29530.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CupredoxinGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00043228001InterPro:IPR008972
PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF90SUPFAM:SSF49503
TMHMM:TMhelixUniParc:UPI0004EE00A0SEG:seg:::
Description
BnaA06g14400DBnaA06g14400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSV6]
Coordinates
chrLK032238:+:474511..479879
Molecular Weight (calculated)
66689.2 Da
IEP (calculated)
9.148
GRAVY (calculated)
0.052
Length
606 amino acids
Sequence
(BLAST)
001: MAGGCSTNLS VVGTAVSVSA TVLVSASLLI SIAVSVSIAV SLPSGIRLHS GIHLRSGIII ISTLYRLVIS LLIFYVQSYG FSSNFILQCL QLFVVLSIQT
101: FYPATRVYLQ VPVPLLVPFV PIFVVIFHYS LQPKDLFGCL YPCPAGIQNR KNSFQDGVCG TTCPIPPGKN YTYALQVKDQ IGSFYYFPSL GFHKAAGGFG
201: GIRISSRPMI PVPFPPPADD YTVLIGDWYK TDHKALRAQL DNGGKLPPPD GILINGLSSG ATLNIQPGNT YRLRISNVGL QNSLNFRIQN HEMTLVEVEG
301: THTLQNVYSS LDVHVGQSYS VLITANQPSK DYYIVVSSRL TPTVLTTTGV LHYSNSAEPV SGPIPAAPVP MSWSFNQART IRTNLTASGP RPNPQGTYHY
401: GMVNVTRTIK LVSSVGQIEG KQRYSVNSAS FTPSDTPLKL ADYFKIDGVY KPGSISDQPP YAPTFPVTSV LQADYKAFVE IVFENSEDIV QSWHFNGHSF
501: FVVGMELGKW RPGRRKVYNL NDAVSRCTIQ VYPRSWTAIY VGLDNVGMWN LRSELWERQY LGQQLYVRVY TNSTSLRDEY QIPTNALLCG RASGAHKELL
601: LSGFEN
Best Arabidopsis Sequence Match ( AT1G21850.1 )
(BLAST)
001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F
Arabidopsis Description
sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.