CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32795	Canola	cytosol	20.27	43.27
Bra032154.1-P	Field mustard	extracellular	99.1	40.82
CDY38959	Canola	extracellular	99.1	40.82
AT2G23630.2	Thale cress	extracellular	85.59	34.8
CDX72617	Canola	extracellular	80.18	32.9
CDY42716	Canola	extracellular	79.28	32.59
CDX75611	Canola	extracellular	79.28	32.53
CDX69261	Canola	extracellular	74.32	31.31
KRH04708	Soybean	endoplasmic reticulum	67.57	27.57
CDY68812	Canola	cytosol, peroxisome	54.5	27.13
VIT_00s0253g00050.t01	Wine grape	extracellular, mitochondrion	68.02	25.12
CDX81353	Canola	extracellular	57.21	23.48
CDY01453	Canola	extracellular, golgi	57.21	23.3
CDY18626	Canola	extracellular	56.76	23.29
CDY43557	Canola	extracellular	54.5	22.37
CDY12788	Canola	extracellular	54.5	22.28
CDY16369	Canola	mitochondrion	47.3	22.15
CDX82897	Canola	extracellular	52.7	21.63
CDX79120	Canola	extracellular	52.7	21.63
CDX97352	Canola	mitochondrion	47.3	21.52
CDX91548	Canola	cytosol	47.75	21.33
CDY43352	Canola	extracellular, plasma membrane	47.3	20.63
CDY67479	Canola	extracellular	50.0	20.52
CDY35790	Canola	extracellular	50.0	20.48
CDX73238	Canola	extracellular	49.55	20.33
CDX87633	Canola	extracellular	49.55	20.33
CDY68834	Canola	extracellular, vacuole	49.55	20.04
CDY55201	Canola	extracellular	49.55	20.04
CDX82541	Canola	extracellular, plasma membrane	49.55	19.82
CDY43995	Canola	extracellular, plasma membrane	49.55	19.82
CDY31468	Canola	extracellular	49.1	19.78
CDX75707	Canola	extracellular, plasma membrane, vacuole	49.1	19.64
CDY23596	Canola	extracellular, plasma membrane	49.1	19.64
CDX82540	Canola	extracellular	47.3	19.06
CDY64276	Canola	cytosol	52.7	19.06
CDY43353	Canola	extracellular, plasma membrane, vacuole	47.3	18.95
CDY24188	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.85	18.91
CDX75708	Canola	extracellular	46.85	18.87
CDY23597	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.4	18.66
CDY43994	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.4	18.66
CDY24189	Canola	extracellular, plasma membrane, vacuole	46.4	18.59
CDY10549	Canola	endoplasmic reticulum, extracellular, plasma membrane	45.95	18.58
CDY56013	Canola	endoplasmic reticulum, extracellular, plasma membrane	45.95	18.58
CDY50029	Canola	extracellular	44.59	18.33
CDY54804	Canola	extracellular, mitochondrion, nucleus, plastid	52.7	18.31
CDY39058	Canola	extracellular	44.59	18.17
CDY13534	Canola	extracellular	44.59	18.17
CDY29530	Canola	plastid	49.1	17.99
CDY54363	Canola	extracellular	42.34	17.25
CDY00478	Canola	cytosol	29.73	17.1
CDY05676	Canola	extracellular, plasma membrane, vacuole	44.59	16.61
CDY48757	Canola	extracellular, plasma membrane, vacuole	44.14	16.47
CDY64023	Canola	extracellular	43.24	16.41
CDY46940	Canola	plasma membrane	43.69	16.25
CDX91586	Canola	extracellular	43.69	16.25
CDX97339	Canola	plasma membrane	42.79	16.21
CDY04429	Canola	plasma membrane	42.79	16.21
CDX99917	Canola	plasma membrane	43.24	16.08
CDY38866	Canola	extracellular	42.34	16.07
CDX90830	Canola	extracellular	42.34	16.07
CDX89433	Canola	plasma membrane	43.24	16.05
CDX94466	Canola	extracellular, plasma membrane, plastid, vacuole	43.24	16.03
CDY49392	Canola	extracellular	26.58	13.23
CDX76855	Canola	cytoskeleton, cytosol, extracellular	13.06	11.65
CDX89588	Canola	cytosol	6.31	5.09
CDY68850	Canola	extracellular	0.45	0.33
CDY48940	Canola	extracellular	0.0	0.0
CDY68876	Canola	cytosol	0.0	0.0
KRH57766	Soybean	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:CDX89586	EnsemblPlantsGene:GSBRNA2T00149925001	Gene3D:2.60.40.420	GO:A0A078DK45	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:Cu-oxidase_2	InterPro:Cupredoxin	InterPro:IPR008972	PANTHER:PTHR11709	PANTHER:PTHR11709:SF113	PFAM:PF07731
ProteinID:CDX89586	ProteinID:CDX89586.1	SUPFAM:SSF49503	UniParc:UPI0004EF0F60	MapMan:35.1	:

Description

BnaC04g36050D

Coordinates

chrLK031859:-:1410550..1417283

Molecular Weight (calculated)

25413.3 Da

IEP (calculated)

10.213

GRAVY (calculated)

-0.377

Length

222 amino acids

Sequence
(BLAST)

001: MKQARTIRLN LTANAARPNP QGAFHYGTIP ISQTLVLANA RTKIDGKLRY TVNRVSYVNP TTPLKLADWY NIPGVFDFKT IKNIPTPGPS ILGTSVLDFA
101: LHEYVEFVFQ NNERSIQSWH IDGTNAYVVG YGTGTWNVAM RKRYNYVDAV SRHTFQVYPM SWTSVLASLD NKGMWNVRSQ IWSRRYLGQE LYVRVWNNER
201: SLYTEAEPPV NALYCGKAKR PV

Best Arabidopsis Sequence Match ( AT2G23630.1 )
(BLAST)

001: MKQKHLLLLG FLLAYCFSSV FVINAEDPYL FFTWTVTYGT RSPLGVPQQV ILINGQFPGP PIEGVTNNNI VVNVINKLDE PFLITWNGIK QRKMSWQDGV
101: LGTNCPIQPK SSWTYHFQLK DQIGTYAYFA STSMHRASGA FGALNVNQRS VIFVPYPKPD ADFTLLVSDW YKMGHKELQR RLDSSRALPP PDGLLINGAS
201: KGLVFTGQHG KIYRFRISNV GISTSINFRI QGHMMTLVEV EGSHTLQEVY ESLDIHVGQS VTVLVTLKAP VKDYFIVAST RFTKPILTTT GILSYQGSKI
301: RPSHPLPIGP TYHIHWSMKQ ARTIRLNLTA NAARPNPQGS FHYGTIPINR TFVLANGRAM INGKLRYTVN RVSYVNPATP LKLADWFNIP GVFNFKTIMN
401: IPTPGPSILG TSVFDVALHE YVEFVFQNNE GSIQSWHLDG TSAYVVGYGS GTWNMAKRRG YNLVDAVSRH TFQVYPMSWT SILVSLDNKG MWNLRSQIWS
501: RRYLGQELYV RVWNNEKSLY TESEPPVNVL FCGKAKHPRL I

Arabidopsis Description

sks16SKU5 similar 16 [Source:TAIR;Acc:AT2G23630]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.