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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38866 Canola extracellular 95.38 95.38
CDX99917 Canola plasma membrane 84.27 82.58
CDX91586 Canola extracellular 82.56 80.9
CDY46940 Canola plasma membrane 81.88 80.23
AT5G51480.1 Thale cress extracellular, plasma membrane 78.8 77.87
CDX89433 Canola plasma membrane 76.58 74.92
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 76.41 74.62
CDY00478 Canola cytosol 48.38 73.32
PGSC0003DMT400035984 Potato plasma membrane 65.98 65.09
KRH62611 Soybean nucleus 65.81 65.03
KRH56354 Soybean extracellular 65.47 64.81
Solyc03g083900.2.1 Tomato extracellular 65.3 64.53
VIT_16s0022g00680.t01 Wine grape plasma membrane 64.44 63.68
CDY68876 Canola cytosol 12.14 63.39
CDX97339 Canola plasma membrane 63.42 63.31
CDY04429 Canola plasma membrane 63.08 62.97
CDX90830 Canola extracellular 62.91 62.91
CDY48757 Canola extracellular, plasma membrane, vacuole 55.56 54.62
CDY05676 Canola extracellular, plasma membrane, vacuole 55.21 54.19
CDY48940 Canola extracellular 6.5 48.72
CDX87633 Canola extracellular 44.62 48.24
CDX73238 Canola extracellular 44.62 48.24
CDY68850 Canola extracellular 24.96 48.18
CDY55201 Canola extracellular 45.13 48.09
CDY67479 Canola extracellular 44.44 48.06
CDY35790 Canola extracellular 44.44 47.97
CDY68834 Canola extracellular, vacuole 44.96 47.91
CDY68812 Canola cytosol, peroxisome 36.24 47.53
CDX82897 Canola extracellular 43.76 47.32
CDX79120 Canola extracellular 43.76 47.32
CDY43557 Canola extracellular 42.73 46.21
CDX69261 Canola extracellular 41.54 46.11
CDY31468 Canola extracellular 43.25 45.92
CDX81353 Canola extracellular 42.39 45.84
CDY18626 Canola extracellular 42.39 45.84
CDX72617 Canola extracellular 42.22 45.66
CDY38959 Canola extracellular 42.05 45.64
CDY42716 Canola extracellular 42.05 45.56
CDY49392 Canola extracellular 34.7 45.52
CDY01453 Canola extracellular, golgi 42.05 45.14
CDX75611 Canola extracellular 41.71 45.1
CDX82541 Canola extracellular, plasma membrane 42.73 45.05
CDX75707 Canola extracellular, plasma membrane, vacuole 42.56 44.86
CDX75708 Canola extracellular 42.22 44.83
CDY50029 Canola extracellular 41.37 44.81
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 42.22 44.75
CDX82540 Canola extracellular 42.05 44.65
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 41.88 44.63
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 41.88 44.63
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 42.05 44.57
CDY43353 Canola extracellular, plasma membrane, vacuole 42.05 44.4
CDY39058 Canola extracellular 41.37 44.4
CDY12788 Canola extracellular 41.2 44.38
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 41.71 44.36
CDY43995 Canola extracellular, plasma membrane 42.05 44.32
CDY24189 Canola extracellular, plasma membrane, vacuole 41.88 44.22
CDY13534 Canola extracellular 41.2 44.22
CDY23596 Canola extracellular, plasma membrane 41.88 44.14
CDX91548 Canola cytosol 37.44 44.06
CDY43352 Canola extracellular, plasma membrane 37.95 43.61
CDX89586 Canola mitochondrion 16.41 43.24
CDY54363 Canola extracellular 40.0 42.94
CDX97352 Canola mitochondrion 35.73 42.83
CDY64276 Canola cytosol 42.91 40.88
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 42.56 38.97
CDX89588 Canola cytosol 18.29 38.91
CDY16369 Canola mitochondrion 30.77 37.97
CDY29530 Canola plastid 38.97 37.62
CDY32795 Canola cytosol 6.5 36.54
CDX76855 Canola cytoskeleton, cytosol, extracellular 11.79 27.71
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078J9R9UniProt:A0A078J9R9EnsemblPlants:CDY64023ProteinID:CDY64023
ProteinID:CDY64023.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00040804001
InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF123
SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF4ACCSEG:seg:
Description
BnaCnng43000DBnaCnng43000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9R9]
Coordinates
chrLK034388:+:22181..24681
Molecular Weight (calculated)
65472.9 Da
IEP (calculated)
8.038
GRAVY (calculated)
-0.205
Length
585 amino acids
Sequence
(BLAST)
001: MSPPRFSIFA LALLFGLSLA EDPAISYVYE LSYLTASPLG VPQQVIAVNG IFPGPVVTAT TNYNVEVNVF NRLDEPLLLT WNGIEMRRNS WQDGVLGTNC
101: PIPPQWNFTY SFQVKDQIGS FFYFPSLNFQ KASGGFGPIV IDNQDRIPLP FAKPDGEITF MIGDWYTQNH TVLRSVLDSG KELEMPDGVL INGKGPYKYN
201: SSVPDGIRYE TVNVDPGKTY RIRVHNVGIS TSLNLRIQSH KLLLVETEGR YTSQTNFTDF DIHVGQSYSF LVTMDQNASS DYYIVASARF VDETVWQRVT
301: GVGILRYSNS KGPASGPLPV PSTDVSHPWT VMNQQRAIKQ NTSSSGARPN PQGSYHYGQI NITGTYIFRT MAPTIINGSL RATLNGVSFL NPSTPMRLAD
401: KHSVKGVYKM DFPSRPVDRR PPRLGSSIIN ATYRSFVQII FQNNDTKVQS FHIDGYSFYV VAMDFGNWTE DRKGSYNNWD AISRSTIEVY PGAWTAVLMS
501: LDNAGVWNIR VENLDRWYLG QETYIRIINP EENGKTEMGQ PKNVLYCGAL RSLQKQQVHS SASSMLIGNL ILIFSFIMVL LASPC
Best Arabidopsis Sequence Match ( AT4G12420.1 )
(BLAST)
001: MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC
101: PIPPKWNWTY EFQVKDQIGS FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG KDLGMPDGVL INGKGPYRYN
201: DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV
301: TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA
401: DKLKVKDVYK LDFPKRPLTG PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD GIARSTIQVY PGAWSAILIS
501: LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH
Arabidopsis Description
SKU5Monocopper oxidase-like protein SKU5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU40]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.