Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- plastid 1
- vacuole 4
- plasma membrane 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G25240.1 | Thale cress | plasma membrane | 80.74 | 81.15 |
| CDX91586 | Canola | extracellular | 80.74 | 80.07 |
| CDY46940 | Canola | plasma membrane | 80.07 | 79.4 |
| CDX99917 | Canola | plasma membrane | 80.07 | 79.4 |
| Bra022551.1-P | Field mustard | plasma membrane | 80.07 | 79.4 |
| Bra029171.1-P | Field mustard | extracellular | 78.38 | 79.32 |
| CDY38866 | Canola | extracellular | 78.21 | 79.15 |
| CDY64023 | Canola | extracellular | 77.87 | 78.8 |
| CDY00478 | Canola | cytosol | 44.59 | 68.39 |
| PGSC0003DMT400035984 | Potato | plasma membrane | 66.55 | 66.44 |
| VIT_16s0022g00680.t01 | Wine grape | plasma membrane | 66.22 | 66.22 |
| Solyc03g083900.2.1 | Tomato | extracellular | 66.05 | 66.05 |
| KRH62611 | Soybean | nucleus | 64.86 | 64.86 |
| KRH56354 | Soybean | extracellular | 64.36 | 64.47 |
| AT4G12420.2 | Thale cress | extracellular, plasma membrane | 62.84 | 63.37 |
| AT5G48450.1 | Thale cress | extracellular | 54.56 | 52.01 |
| Bra034914.1-P | Field mustard | extracellular | 6.42 | 48.72 |
| AT1G76160.1 | Thale cress | extracellular | 44.26 | 48.43 |
| AT4G22010.1 | Thale cress | extracellular | 43.92 | 48.06 |
| AT4G37160.1 | Thale cress | extracellular | 43.41 | 47.5 |
| CDY48940 | Canola | extracellular | 6.25 | 47.44 |
| AT1G21860.1 | Thale cress | extracellular | 43.07 | 47.4 |
| AT1G21850.1 | Thale cress | extracellular | 43.92 | 47.19 |
| AT1G41830.1 | Thale cress | extracellular | 43.07 | 47.05 |
| AT3G13390.1 | Thale cress | extracellular, plasma membrane, vacuole | 42.91 | 45.85 |
| AT4G38420.1 | Thale cress | extracellular | 42.4 | 45.72 |
| AT2G23630.2 | Thale cress | extracellular | 42.06 | 45.6 |
| AT1G55570.1 | Thale cress | extracellular, plasma membrane | 42.57 | 45.41 |
| AT3G13400.1 | Thale cress | extracellular, plasma membrane | 42.23 | 45.37 |
| AT1G75790.1 | Thale cress | extracellular | 41.22 | 44.77 |
| AT1G55560.1 | Thale cress | extracellular | 41.39 | 44.63 |
| AT4G28090.1 | Thale cress | extracellular | 41.22 | 44.61 |
| AT5G66920.1 | Thale cress | extracellular, plasma membrane, vacuole | 39.53 | 42.86 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | EntrezGene:835222 | ProteinID:AED96089.1 | ArrayExpress:AT5G51480 | EnsemblPlantsGene:AT5G51480 |
| RefSeq:AT5G51480 | TAIR:AT5G51480 | RefSeq:AT5G51480-TAIR-G | EnsemblPlants:AT5G51480.1 | TAIR:AT5G51480.1 | Unigene:At.29677 |
| ProteinID:BAB08664.1 | EMBL:BT004129 | EMBL:BT004990 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 | InterPro:Cu-oxidase_3 |
| InterPro:CuRO_1_AAO-like | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009506 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016722 | GO:GO:0031225 | GO:GO:0046658 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR008972 | RefSeq:NP_199961.1 | PFAM:PF00394 | PFAM:PF07731 |
| PFAM:PF07732 | PO:PO:0000005 | PO:PO:0000084 | PO:PO:0001017 | PO:PO:0001078 | PO:PO:0001185 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11709 |
| PANTHER:PTHR11709:SF123 | UniProt:Q9FHN6 | Symbol:SKS2 | SUPFAM:SSF49503 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI000000C298 | SEG:seg | : | : | : | : |
Description
SKS2Monocopper oxidase-like protein SKS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN6]
Coordinates
chr5:+:20910204..20913547
Molecular Weight (calculated)
66410.7 Da
IEP (calculated)
6.277
GRAVY (calculated)
-0.205
Length
592 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATDFFFAF VFSFALIFGF SFAGDPYVSY DFTLSYITAS PLGVPQQVIA VNGKFPGPVI NATTNYNVHV NVLNHLDEPL LLTWPGVQMR RNSWQDGVLG
101: TNCPIPPNWN FTYDFQLKDQ IGSYFYSPSL NFQRASGGFG ALIINNRDLV PIPFTEPDGE IIFIIGDWYT QNHTALRRIL DSGKELGMPD GVLINGKGPF
201: KYNSSVPDGI EHETVNVDPG KTYRIRVHNV GISTSLNFRI QNHKLLLIET EGRYTSQMNF TDFDVHVGQS YSFLVTMDQN ATSDYYIVAS ARFVNETVWQ
301: RVTGVGILHY SNSKGPASGP LPVSATDVNH PWSAMNQPRA IKQNTSASGA RPNPQGSFHY GQINITRTYI LRSLPPTKIN GKLRATLNGI SFVNPSTPMR
401: LADDHKVKGD YMLDFPDRPL DEKLPRLSSS IINATYKGFI QVIFQNNDTK IQSFHIDGYA FYVVAMDFGI WSEDRNSSYN NWDAVARSTV EVYPGAWTAV
501: LISLDNVGVW NIRVENLDRW YLGQETYMRI INPEENGSTE MDPPENVMYC GALQAMQKEQ HHSSATKSMT NGQLILIFSM MMVLLSSFSS FC
101: TNCPIPPNWN FTYDFQLKDQ IGSYFYSPSL NFQRASGGFG ALIINNRDLV PIPFTEPDGE IIFIIGDWYT QNHTALRRIL DSGKELGMPD GVLINGKGPF
201: KYNSSVPDGI EHETVNVDPG KTYRIRVHNV GISTSLNFRI QNHKLLLIET EGRYTSQMNF TDFDVHVGQS YSFLVTMDQN ATSDYYIVAS ARFVNETVWQ
301: RVTGVGILHY SNSKGPASGP LPVSATDVNH PWSAMNQPRA IKQNTSASGA RPNPQGSFHY GQINITRTYI LRSLPPTKIN GKLRATLNGI SFVNPSTPMR
401: LADDHKVKGD YMLDFPDRPL DEKLPRLSSS IINATYKGFI QVIFQNNDTK IQSFHIDGYA FYVVAMDFGI WSEDRNSSYN NWDAVARSTV EVYPGAWTAV
501: LISLDNVGVW NIRVENLDRW YLGQETYMRI INPEENGSTE MDPPENVMYC GALQAMQKEQ HHSSATKSMT NGQLILIFSM MMVLLSSFSS FC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.