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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38866 Canola extracellular 82.75 84.44
CDY64023 Canola extracellular 82.58 84.27
CDX91586 Canola extracellular 83.92 83.92
CDY46940 Canola plasma membrane 83.58 83.58
AT5G51480.1 Thale cress extracellular, plasma membrane 79.4 80.07
CDY00478 Canola cytosol 51.76 80.05
CDX89433 Canola plasma membrane 76.55 76.42
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 76.55 76.29
PGSC0003DMT400035984 Potato plasma membrane 67.67 68.13
Solyc03g083900.2.1 Tomato extracellular 66.5 67.06
KRH56354 Soybean extracellular 66.33 67.01
KRH62611 Soybean nucleus 66.0 66.55
CDX97339 Canola plasma membrane 64.32 65.53
CDY04429 Canola plasma membrane 63.99 65.19
CDX90830 Canola extracellular 63.82 65.13
VIT_16s0022g00680.t01 Wine grape plasma membrane 64.49 65.03
CDY68876 Canola cytosol 11.56 61.61
CDY48757 Canola extracellular, plasma membrane, vacuole 54.44 54.62
CDY05676 Canola extracellular, plasma membrane, vacuole 53.94 54.03
CDY68850 Canola extracellular 25.63 50.49
CDX87633 Canola extracellular 44.56 49.17
CDY55201 Canola extracellular 45.06 49.0
CDX82897 Canola extracellular 44.39 48.98
CDX79120 Canola extracellular 44.39 48.98
CDX73238 Canola extracellular 44.39 48.98
CDY68834 Canola extracellular, vacuole 44.89 48.82
CDY67479 Canola extracellular 43.22 47.69
CDY35790 Canola extracellular 43.22 47.6
CDY48940 Canola extracellular 6.2 47.44
CDY31468 Canola extracellular 43.22 46.82
CDY38959 Canola extracellular 41.88 46.38
CDY49392 Canola extracellular 34.17 45.74
CDY68812 Canola cytosol, peroxisome 34.17 45.74
CDX69261 Canola extracellular 40.03 45.35
CDX72617 Canola extracellular 40.87 45.1
CDX75708 Canola extracellular 41.54 45.01
CDY42716 Canola extracellular 40.7 45.0
CDX82541 Canola extracellular, plasma membrane 41.71 44.86
CDX82540 Canola extracellular 41.37 44.83
CDY50029 Canola extracellular 40.54 44.81
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 41.21 44.81
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 41.37 44.75
CDX75707 Canola extracellular, plasma membrane, vacuole 41.54 44.68
CDY43353 Canola extracellular, plasma membrane, vacuole 41.37 44.58
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 41.21 44.57
CDY18626 Canola extracellular 40.37 44.55
CDX81353 Canola extracellular 40.37 44.55
CDY43557 Canola extracellular 40.37 44.55
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 41.04 44.55
CDY23596 Canola extracellular, plasma membrane 41.37 44.5
CDY43995 Canola extracellular, plasma membrane 41.37 44.5
CDX91548 Canola cytosol 37.02 44.47
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 40.87 44.44
CDY24189 Canola extracellular, plasma membrane, vacuole 41.21 44.4
CDX75611 Canola extracellular 40.2 44.36
CDY01453 Canola extracellular, golgi 40.37 44.22
CDY39058 Canola extracellular 40.2 44.04
CDY13534 Canola extracellular 40.03 43.85
CDX97352 Canola mitochondrion 35.68 43.65
CDY43352 Canola extracellular, plasma membrane 37.19 43.61
CDY12788 Canola extracellular 39.53 43.46
CDX89586 Canola mitochondrion 16.08 43.24
CDY54363 Canola extracellular 39.2 42.94
CDY64276 Canola cytosol 41.71 40.55
CDX89588 Canola cytosol 18.26 39.64
CDY29530 Canola plastid 39.7 39.11
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 41.54 38.81
CDY16369 Canola mitochondrion 30.65 38.61
CDY32795 Canola cytosol 6.03 34.62
CDX76855 Canola cytoskeleton, cytosol, extracellular 12.06 28.92
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078EFR7EnsemblPlants:CDX99917ProteinID:CDX99917ProteinID:CDX99917.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CupredoxinGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00108744001InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732
PANTHER:PTHR11709PANTHER:PTHR11709:SF123SUPFAM:SSF49503SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EB3B08
Description
BnaC09g27880D
Coordinates
chrLK031915:-:660307..662768
Molecular Weight (calculated)
66725.3 Da
IEP (calculated)
7.386
GRAVY (calculated)
-0.192
Length
597 amino acids
Sequence
(BLAST)
001: MAAASFLSRF SMIWAFVITL AILAGFTLAG DPFVSCVFEI TYITASPLGV PQQVIAVNGK FPGPVITATT NYNVDVSVFN RLDEPLLLAW NGIEMRRNSW
101: QDGVLGTNCP IPPQWNFTYS FQVKDQIGSF FYFPSLHFQR ASGGFGPIVI NNRDLIPIPF SKPDGDISFM IGDWYTHNHT ALRSVLDSGE ELGMPDGVLI
201: NGKGPYKYNT TVPDGIQYET VNVDPGKTYR IRVHNVGVST SLNFRIQNHK LLLVETEGRY TSQTNFTDFD IHVGQSYSFL VTMDQNASSD YYIVASARFV
301: NETEWQRVTG VGILHYSNSK GHTSGPLPLP ATDVSHPWSV MNQQRAIKQN TSASGARPNP QGSYHYGQIN ITDTYILRSM PPTKINGSLR STLNGVSFLN
401: PSTPMTLADK HRLKGVYKLD FPSRPVDSKP PRLGSSIINA TYKGFIQVIF QNNDTKLQTF HIDGYSFYVV AMDFGNWTED RKGSYNNWDA ISRSTIEVYP
501: GAWTAVLISL DNVGVWNIRA ENLDRWYLGQ ETYMRIINPE ENGKTDMGQP QNALYCGALR SMQKEQLRSS ATSILNGQLN LILTFMMLLF ASVTTFC
Best Arabidopsis Sequence Match ( AT5G51480.1 )
(BLAST)
001: MAATDFFFAF VFSFALIFGF SFAGDPYVSY DFTLSYITAS PLGVPQQVIA VNGKFPGPVI NATTNYNVHV NVLNHLDEPL LLTWPGVQMR RNSWQDGVLG
101: TNCPIPPNWN FTYDFQLKDQ IGSYFYSPSL NFQRASGGFG ALIINNRDLV PIPFTEPDGE IIFIIGDWYT QNHTALRRIL DSGKELGMPD GVLINGKGPF
201: KYNSSVPDGI EHETVNVDPG KTYRIRVHNV GISTSLNFRI QNHKLLLIET EGRYTSQMNF TDFDVHVGQS YSFLVTMDQN ATSDYYIVAS ARFVNETVWQ
301: RVTGVGILHY SNSKGPASGP LPVSATDVNH PWSAMNQPRA IKQNTSASGA RPNPQGSFHY GQINITRTYI LRSLPPTKIN GKLRATLNGI SFVNPSTPMR
401: LADDHKVKGD YMLDFPDRPL DEKLPRLSSS IINATYKGFI QVIFQNNDTK IQSFHIDGYA FYVVAMDFGI WSEDRNSSYN NWDAVARSTV EVYPGAWTAV
501: LISLDNVGVW NIRVENLDRW YLGQETYMRI INPEENGSTE MDPPENVMYC GALQAMQKEQ HHSSATKSMT NGQLILIFSM MMVLLSSFSS FC
Arabidopsis Description
SKS2Monocopper oxidase-like protein SKS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN6]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.