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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, cytoskeleton, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • cytoskeleton 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, extracellular
Any Predictor:cytoskeleton, cytosol, extracellular, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38959 Canola extracellular 41.37 19.11
GSMUA_Achr5P26560_001 Banana extracellular 25.3 18.16
CDY68850 Canola extracellular 22.09 18.15
KRH51114 Soybean endoplasmic reticulum 37.75 17.18
CDX72617 Canola extracellular 36.95 17.01
CDX69261 Canola extracellular 35.74 16.89
CDY42716 Canola extracellular 36.55 16.85
Os07t0510900-01 Rice extracellular, peroxisome 31.33 16.81
KRH02049 Soybean nucleus 36.95 16.76
VIT_10s0116g01610.t01 Wine grape extracellular 36.14 16.67
CDX75611 Canola extracellular 36.14 16.64
CDX82897 Canola extracellular 35.74 16.45
TraesCS2A01G224600.1 Wheat extracellular 35.74 16.33
EER90222 Sorghum extracellular 35.74 16.3
CDX79120 Canola extracellular 35.34 16.27
EER97278 Sorghum extracellular, golgi 35.74 16.24
PGSC0003DMT400042483 Potato extracellular 35.34 16.09
Zm00001d014366_P002 Maize extracellular 35.34 16.06
CDY68834 Canola extracellular, vacuole 35.34 16.03
KRH11453 Soybean extracellular 29.32 16.01
HORVU2Hr1G047260.1 Barley extracellular, golgi, vacuole 35.34 15.97
TraesCS2D01G230800.1 Wheat extracellular 34.94 15.96
TraesCS2B01G274800.1 Wheat vacuole 34.94 15.96
CDX73238 Canola extracellular 34.54 15.9
CDX87633 Canola extracellular 34.54 15.9
CDY55201 Canola extracellular 34.94 15.85
CDY67479 Canola extracellular 34.14 15.71
Solyc02g080670.2.1 Tomato nucleus 34.54 15.69
CDY35790 Canola extracellular 34.14 15.68
HORVU7Hr1G105620.1 Barley extracellular 34.14 15.68
TraesCS7B01G359700.1 Wheat extracellular 34.14 15.68
TraesCS7A01G459400.1 Wheat extracellular 34.14 15.62
CDY16369 Canola mitochondrion 29.72 15.61
Os06t0678800-01 Rice extracellular 33.73 15.5
TraesCS7D01G447200.1 Wheat extracellular 33.73 15.5
CDY49392 Canola extracellular 27.71 15.47
Zm00001d021599_P002 Maize extracellular, plasma membrane, vacuole 34.54 15.41
CDY31468 Canola extracellular 33.73 15.24
CDY01453 Canola extracellular, golgi 32.93 15.05
CDX91548 Canola cytosol 29.72 14.89
CDY68812 Canola cytosol, peroxisome 26.51 14.8
CDX81353 Canola extracellular 32.13 14.79
CDY18626 Canola extracellular 32.13 14.79
CDX97352 Canola mitochondrion 28.92 14.75
CDX82541 Canola extracellular, plasma membrane 32.53 14.59
CDY43995 Canola extracellular, plasma membrane 32.53 14.59
CDY12788 Canola extracellular 31.73 14.55
CDX75707 Canola extracellular, plasma membrane, vacuole 32.13 14.41
CDY23596 Canola extracellular, plasma membrane 32.13 14.41
CDX75708 Canola extracellular 31.33 14.16
CDX82540 Canola extracellular 31.33 14.16
CDY43353 Canola extracellular, plasma membrane, vacuole 31.33 14.08
CDY50029 Canola extracellular 30.52 14.07
CDY43557 Canola extracellular 30.52 14.05
CDY64276 Canola cytosol 34.54 14.01
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 30.92 14.0
CDY00478 Canola cytosol 21.69 13.99
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 30.92 13.95
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 30.92 13.95
CDY24189 Canola extracellular, plasma membrane, vacuole 30.92 13.9
CDY13534 Canola extracellular 30.12 13.76
CDY43352 Canola extracellular, plasma membrane 28.11 13.75
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 34.94 13.62
CDY39058 Canola extracellular 29.72 13.58
CDY54363 Canola extracellular 29.72 13.58
CDX90830 Canola extracellular 30.92 13.16
CDY04429 Canola plasma membrane 30.92 13.14
CDX97339 Canola plasma membrane 30.92 13.14
CDX89586 Canola mitochondrion 11.65 13.06
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 28.51 12.93
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 28.51 12.93
CDY29530 Canola plastid 31.33 12.87
CDX89433 Canola plasma membrane 29.32 12.21
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 29.32 12.19
CDX99917 Canola plasma membrane 28.92 12.06
CDY38866 Canola extracellular 27.71 11.79
CDY64023 Canola extracellular 27.71 11.79
CDY48757 Canola extracellular, plasma membrane, vacuole 28.11 11.76
CDY05676 Canola extracellular, plasma membrane, vacuole 28.11 11.74
CDY46940 Canola plasma membrane 28.11 11.73
CDX91586 Canola extracellular 27.31 11.39
CDY68876 Canola cytosol 4.82 10.71
CDX89588 Canola cytosol 11.24 10.18
GSMUA_Achr5P26550_001 Banana cytosol 4.82 9.23
Os07t0510833-00 Rice extracellular 3.61 9.0
CDY32795 Canola cytosol 3.21 7.69
CDY48940 Canola extracellular 2.01 6.41
Protein Annotations
EnsemblPlants:CDX76855EnsemblPlantsGene:GSBRNA2T00127365001Gene3D:2.60.40.420GO:A0A078CIY7GO:GO:0008150GO:GO:0008152
GO:GO:0055114InterPro:Cu-oxidaseInterPro:CupredoxinInterPro:IPR008972PANTHER:PTHR11709PANTHER:PTHR11709:SF113
PFAM:PF00394ProteinID:CDX76855ProteinID:CDX76855.1SEG:segSUPFAM:SSF49503UniParc:UPI0004EDD98C
MapMan:50.1.10:::::
Description
BnaC08g34410D
Coordinates
chrLK031808:+:1500663..1503845
Molecular Weight (calculated)
28786.6 Da
IEP (calculated)
6.416
GRAVY (calculated)
0.050
Length
249 amino acids
Sequence
(BLAST)
001: MHIANGAFGG ILDFSMETIR FSKDYINTLV NWCVLKRLNQ GARKKLDFAR NIPFPDDLLI DDPSKSVTFT VSNGNIYRFW IMSVGILTSI NFGIQGHMIT
101: LVEVEGSHTL EEVYESLDIH VGQSLTVLKN EDQWEHPVHR TLCIRTIILN RNSFTIVSGS SPLFKTIENI PTRGLCILGT FDFAHHEFVF HVFKTGPEAE
201: PEIFWVTVQY DKSILNIKYY KYKLVSCLYG WFIDFDSISG FYWFNKFEI
Best Arabidopsis Sequence Match ( AT2G23630.2 )
(BLAST)
001: MLISTMKQKH LLLLGFLLAY CFSSVFVINA EDPYLFFTWT VTYGTRSPLG VPQQVILING QFPGPPIEGV TNNNIVVNVI NKLDEPFLIT WNGIKQRKMS
101: WQDGVLGTNC PIQPKSSWTY HFQLKDQIGT YAYFASTSMH RASGAFGALN VNQRSVIFVP YPKPDADFTL LVSDWYKMGH KELQRRLDSS RALPPPDGLL
201: INGASKGLVF TGQHGKIYRF RISNVGISTS INFRIQGHMM TLVEVEGSHT LQEVYESLDI HVGQSVTVLV TLKAPVKDYF IVASTRFTKP ILTTTGILSY
301: QGSKIRPSHP LPIGPTYHIH WSMKQARTIR LNLTANAARP NPQGSFHYGT IPINRTFVLA NGRAMINGKL RYTVNRVSYV NPATPLKLAD WFNIPGVFNF
401: KTIMNIPTPG PSILGTSVFD VALHEYVEFV FQNNEGSIQS WHLDGTSAYV VGYGSGTWNM AKRRGYNLVD AVSRHTFQVY PMSWTSILVS LDNKGMWNLR
501: SQIWSRRYLG QELYVRVWNN EKSLYTESEP PVNVLFCGKA KHPRLI
Arabidopsis Description
sks16SKU5 similar 16 [Source:TAIR;Acc:AT2G23630]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.