Factsheet for Zm00001d021599_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97278	Sorghum	extracellular, golgi	91.58	93.25
TraesCS2D01G230800.1	Wheat	extracellular	84.95	86.97
TraesCS2A01G224600.1	Wheat	extracellular	84.77	86.79
TraesCS2B01G274800.1	Wheat	vacuole	83.87	85.87
HORVU2Hr1G047260.1	Barley	extracellular, golgi, vacuole	83.69	84.75
VIT_10s0116g01600.t01	Wine grape	extracellular, mitochondrion	16.49	74.8
VIT_12s0059g00770.t01	Wine grape	extracellular	69.53	71.72
Zm00001d014366_P002	Maize	extracellular	70.07	71.35
VIT_10s0116g01610.t01	Wine grape	extracellular	68.82	71.11
Solyc07g052240.2.1	Tomato	nucleus	68.28	70.17
Solyc02g080700.1.1	Tomato	cytosol	12.37	69.7
PGSC0003DMT400074510	Potato	extracellular	67.38	69.5
KRH25361	Soybean	mitochondrion, nucleus	66.67	69.27
KRH56153	Soybean	mitochondrion, nucleus	66.49	69.09
KRH02049	Soybean	nucleus	67.2	68.31
Bra013582.1-P	Field mustard	extracellular	66.13	68.21
CDX79120	Canola	extracellular	66.13	68.21
PGSC0003DMT400042483	Potato	extracellular	66.85	68.19
KRH51114	Soybean	endoplasmic reticulum	66.85	68.19
KRH26769	Soybean	endoplasmic reticulum	65.41	68.1
Solyc02g080670.2.1	Tomato	nucleus	66.85	68.07
CDX82897	Canola	extracellular	65.95	68.02
Os07t0510833-00	Rice	extracellular	12.19	68.0
AT4G22010.1	Thale cress	extracellular	65.59	67.65
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	58.06	67.5
Solyc07g052230.2.1	Tomato	extracellular	64.7	67.23
KRH11453	Soybean	extracellular	48.92	59.87
Zm00001d026132_P001	Maize	vacuole	61.65	59.83
Zm00001d018696_P001	Maize	extracellular	55.38	53.09
Zm00001d012524_P001	Maize	vacuole	49.64	49.55
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	49.28	49.2
Zm00001d043090_P001	Maize	vacuole	49.1	49.19
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	49.1	48.07
Zm00001d032504_P001	Maize	plasma membrane	48.57	44.72
Zm00001d045599_P001	Maize	plasma membrane	47.31	44.59
Zm00001d024595_P001	Maize	extracellular	45.34	42.31
Zm00001d024594_P001	Maize	extracellular, plasma membrane	45.34	42.03
Zm00001d047156_P002	Maize	cytosol	14.16	39.11
Zm00001d029193_P001	Maize	mitochondrion	46.42	37.48
CDX76855	Canola	cytoskeleton, cytosol, extracellular	15.41	34.54
Zm00001d037444_P001	Maize	mitochondrion	16.13	33.58
Zm00001d004806_P001	Maize	plastid	4.12	27.06

Protein Annotations

EntrezGene:100285637	Gene3D:2.60.40.420	MapMan:50.1.10	UniProt:A0A1D6ICM8	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2
InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972
ProteinID:ONM57617.1	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF106
SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0008450A58	EnsemblPlantsGene:Zm00001d021599	EnsemblPlants:Zm00001d021599_P002
EnsemblPlants:Zm00001d021599_T002	SEG:seg	:	:	:	:

Description

SKU5 similar 4

Coordinates

chr7:+:157782228..157788323

Molecular Weight (calculated)

61248.8 Da

IEP (calculated)

9.490

GRAVY (calculated)

-0.164

Length

558 amino acids

Sequence
(BLAST)

001: MAGGNAGGAA RVLFSILGLA LALPLLVAGD DPYRFFTWTV TYGDIYPLGV KQQGILINNQ FPGPQIEAVT NDNLIINVFN KLNEPFLLSW SGLQQRRNSF
101: EDGVAGTTCP IPPGSNFTYI MQAKDQIGTY YYFPSLAFHK AAGGFGGIRV LSRPQIPVPF PPPAADYTVL IGDCLRYDQL VLGRTDGQDL RYVLDSGVAL
201: GFPDGLLING RGLNGYTFNV QPGRTYRFRI TNVGLATSLN IRFQGHTMKL VEVEGSHTMQ TTYSSLDVHL GQSYSVLLTA DQPGYDYAVV VSTRFTSRII
301: STTAVLRYAN SAGRAPGPLP GGPTIQIDWS LNQARSVRWN LTASGPRPNP QGSYHYGLVP VTRTIRLANS AATIGGKRRY AVNGASYVGP DTPLKVADYY
401: KIGGVFSVGT IADSPPAYGG AAYLRTSVMG ASYRDYVEVV FENGEDEVQS WHIDGYAFWV VGMDGGKWSS ASRQGYNLRD GVSRYTVQVY PRSWTAIYMP
501: LDNVGMWNVR SENWARQYLG QQFYLRVWTP STSLRDEYPI PKNALLCGRA AGRRTRPL

Best Arabidopsis Sequence Match ( AT1G76160.1 )
(BLAST)

001: MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG
101: TTCPIPPGKN YTYILQMKDQ IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL DNGKKLPLPD GILINGRSSG
201: ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP
401: TGGGIYLDTS VMQVDYRTFV EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI LIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP L

Arabidopsis Description

sks5Sks5 [Source:UniProtKB/TrEMBL;Acc:A0A178WJJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.