Factsheet for Zm00001d029193_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
extracellular 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	extracellular, mitochondrion, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92264	Sorghum	extracellular	81.91	95.93
TraesCS3A01G085900.1	Wheat	extracellular	70.04	81.62
TraesCS3B01G101500.1	Wheat	extracellular	70.04	81.21
TraesCS3D01G086400.1	Wheat	extracellular	70.04	81.07
Os01t0100400-01	Rice	extracellular, plasma membrane, vacuole	68.6	79.93
HORVU3Hr1G015510.2	Barley	cytosol	40.52	78.43
TraesCS3B01G101200.1	Wheat	extracellular	69.32	75.08
PGSC0003DMT400074313	Potato	extracellular	60.93	72.21
Solyc09g055930.2.1	Tomato	extracellular	60.49	71.58
VIT_07s0141g00540.t01	Wine grape	extracellular	61.22	71.09
GSMUA_Achr3P17240_001	Banana	cytosol	60.78	70.95
KRH46577	Soybean	mitochondrion	62.08	67.35
CDY48757	Canola	extracellular, plasma membrane, vacuole	57.45	66.72
CDY05676	Canola	extracellular, plasma membrane, vacuole	57.31	66.44
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	57.16	66.39
Zm00001d032504_P001	Maize	plasma membrane	54.7	62.38
Zm00001d045599_P001	Maize	plasma membrane	53.4	62.33
AT5G48450.1	Thale cress	extracellular	54.99	61.19
Zm00001d024595_P001	Maize	extracellular	50.65	58.53
Zm00001d024594_P001	Maize	extracellular, plasma membrane	50.8	58.31
Zm00001d014366_P002	Maize	extracellular	39.07	49.27
Zm00001d021599_P002	Maize	extracellular, plasma membrane, vacuole	37.48	46.42
Zm00001d018696_P001	Maize	extracellular	38.64	45.88
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	37.05	45.8
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	37.34	45.26
Zm00001d026132_P001	Maize	vacuole	37.48	45.04
Zm00001d012524_P001	Maize	vacuole	35.89	44.36
Zm00001d043090_P001	Maize	vacuole	35.6	44.17
Zm00001d047156_P002	Maize	cytosol	11.58	39.6
Zm00001d037444_P001	Maize	mitochondrion	12.16	31.34
Zm00001d004806_P001	Maize	plastid	3.33	27.06

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	UniProt:A0A1D6K3D2	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0016020
GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	ProteinID:ONL98156.1	PFAM:PF00394	PFAM:PF07731
PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF58	SUPFAM:SSF49503	UniParc:UPI000221A956	EnsemblPlantsGene:Zm00001d029193
EnsemblPlants:Zm00001d029193_P001	EnsemblPlants:Zm00001d029193_T001	SEG:seg	:	:	:

Description

SKU5 similar 3

Coordinates

chr1:-:61664668..61668706

Molecular Weight (calculated)

76599.1 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.074

Length

691 amino acids

Sequence
(BLAST)

001: MLFPVELERS AGRQRPQDTP TSSFFSAASP PTLFPLLCWV LRFALLAALR LSPISTRLVL AWLPLPTDST GFKRPTSAET WPRACVRILR TRSPEPPGPI
101: EFRLPMPALL LLLLLAAAPA PARAGDPYSY YDWEVSYISA QPLGVKQKVI GINGQFPGPP LNVTTNWNVV VNVRNALDEP LLLTWNGVQQ RKTAWQDGVL
201: GTNCAIPAGW NWTYTFQVKD QVGSFFYFPS TPLHRAAGGY GAITINNRDV IPIPFAFPDG DITLFIGDWY NRGHRELRSA LDGGTLLGAP DGVLINGLGP
301: YQYNESVVPP GIVYERINVE PGKTYRFRVH NVGVSTSLNF RIQNHNLLLV ETEGSYTSQQ NYTNLDIHVG QSYSFLVTMD QNASTDYYVV ASARFVDAAV
401: VDKLTGVAIL HYSNSQGPAS GPLPDPPNDQ YDTAFSINQA RSIRWNVTAS GARPNPQGSF HYGDITVTDV FLLQSRAPEL IDGKLRSTLN EISYIAPSTP
501: LVLAQIFNVP GVFKLDFPNH PMNRLPKVDT SIINGTYKGF MEIIFQNNAT NVQSYHLDGY AFFVVGMDYG LWTENSRGTY NKWDGVARST IQVFPGAWTA
601: ILVFLDNAGI WNLRVQNLDT WYLGQEVYIN VVNPEDSSTT LPDNAIFCGA LSSLQKEQSH RFQYSKAAPV PQWGETISLL VLLACFALWS L

Best Arabidopsis Sequence Match ( AT5G48450.1 )
(BLAST)

001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VNINRLCNTK KILDSTAKAQ
601: TDLSLVETDR ISEKNRDRIS Y

Arabidopsis Description

sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.