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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48757 Canola extracellular, plasma membrane, vacuole 98.32 98.49
AT5G48450.1 Thale cress extracellular 87.25 83.74
VIT_07s0141g00540.t01 Wine grape extracellular 74.83 74.96
PGSC0003DMT400074313 Potato extracellular 72.48 74.1
Solyc09g055930.2.1 Tomato extracellular 71.98 73.46
KRH46577 Soybean mitochondrion 74.5 69.7
GSMUA_Achr3P17240_001 Banana cytosol 69.13 69.59
CDY68876 Canola cytosol 12.92 68.75
EER92264 Sorghum extracellular 66.11 66.78
TraesCS3A01G085900.1 Wheat extracellular 65.77 66.1
TraesCS3D01G086400.1 Wheat extracellular 65.77 65.66
TraesCS3B01G101500.1 Wheat extracellular 65.6 65.6
Os01t0100400-01 Rice extracellular, plasma membrane, vacuole 63.59 63.91
HORVU3Hr1G015510.2 Barley cytosol 36.74 61.34
TraesCS3B01G101200.1 Wheat extracellular 65.6 61.29
CDX90830 Canola extracellular 59.23 60.34
CDX97339 Canola plasma membrane 59.23 60.24
CDY04429 Canola plasma membrane 58.89 59.9
Zm00001d029193_P001 Maize mitochondrion 66.44 57.31
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 56.21 55.93
CDX89433 Canola plasma membrane 56.04 55.85
CDY38866 Canola extracellular 54.7 55.73
CDX91586 Canola extracellular 55.7 55.61
CDY46940 Canola plasma membrane 55.7 55.61
CDY64023 Canola extracellular 54.19 55.21
CDX99917 Canola plasma membrane 54.03 53.94
CDY68850 Canola extracellular 27.01 53.14
CDY67479 Canola extracellular 45.3 49.91
CDX72617 Canola extracellular 45.3 49.91
CDY35790 Canola extracellular 45.3 49.82
CDX81353 Canola extracellular 45.13 49.72
CDX69261 Canola extracellular 43.96 49.72
CDY42716 Canola extracellular 44.97 49.63
CDY18626 Canola extracellular 44.97 49.54
CDX73238 Canola extracellular 44.97 49.54
CDX87633 Canola extracellular 44.97 49.54
CDY68812 Canola cytosol, peroxisome 36.91 49.33
CDY49392 Canola extracellular 36.91 49.33
CDY01453 Canola extracellular, golgi 44.97 49.17
CDX75611 Canola extracellular 44.63 49.17
CDY43557 Canola extracellular 44.63 49.17
CDY00478 Canola cytosol 31.54 48.7
CDY12788 Canola extracellular 44.3 48.62
CDY43352 Canola extracellular, plasma membrane 41.44 48.53
CDX82541 Canola extracellular, plasma membrane 45.13 48.47
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 44.63 48.45
CDX79120 Canola extracellular 43.96 48.43
CDX82897 Canola extracellular 43.96 48.43
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 44.46 48.27
CDX75707 Canola extracellular, plasma membrane, vacuole 44.63 47.93
CDY55201 Canola extracellular 44.13 47.91
CDY38959 Canola extracellular 43.29 47.87
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 44.13 47.82
CDY43995 Canola extracellular, plasma membrane 44.46 47.75
CDY23596 Canola extracellular, plasma membrane 44.46 47.75
CDY68834 Canola extracellular, vacuole 43.96 47.72
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 44.13 47.64
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 44.13 47.64
CDX75708 Canola extracellular 43.96 47.55
CDX82540 Canola extracellular 43.96 47.55
CDY43353 Canola extracellular, plasma membrane, vacuole 43.79 47.11
CDY31468 Canola extracellular 43.46 47.01
CDY24189 Canola extracellular, plasma membrane, vacuole 43.46 46.75
CDY50029 Canola extracellular 42.28 46.67
CDY39058 Canola extracellular 41.95 45.87
CDY13534 Canola extracellular 41.95 45.87
CDX97352 Canola mitochondrion 37.25 45.49
CDY54363 Canola extracellular 41.44 45.32
CDY48940 Canola extracellular 5.87 44.87
CDX89586 Canola mitochondrion 16.61 44.59
CDX91548 Canola cytosol 36.41 43.66
CDY64276 Canola cytosol 44.13 42.83
CDX89588 Canola cytosol 19.46 42.18
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 44.13 41.16
CDY29530 Canola plastid 40.1 39.44
CDY32795 Canola cytosol 6.71 38.46
CDY16369 Canola mitochondrion 30.2 37.97
CDX76855 Canola cytoskeleton, cytosol, extracellular 11.74 28.11
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078EWS2EnsemblPlants:CDY05676ProteinID:CDY05676ProteinID:CDY05676.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CupredoxinGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00120674001InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709
PANTHER:PTHR11709:SF58SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF129DSEG:seg
Description
BnaC02g38610D
Coordinates
chrLK031963:+:867308..870042
Molecular Weight (calculated)
66123.6 Da
IEP (calculated)
8.385
GRAVY (calculated)
-0.148
Length
596 amino acids
Sequence
(BLAST)
001: MRCSPPHLPC TSLVVLFLSV ATVCLAADPY VFFDWTVSYL TASPLGTRQQ VIGINGQFPG PILNVTTNWN VVVNVKNNLD EPLLLTWNGI QHRKNSWQDG
101: VLGTNCPIPS GWNWTYEFQV KDQIGSFFYF PSTNFQRAAG GYGGIIINNR DIIPVPFLLP DGDVTLFISD WFTKSHKKLR KDVESKIDFG APDGILINGF
201: GPFPYSSELA SGGFPYGTIN VEPGRTYRFR VHNSGIATTL NFRIQNHNLL LVETEGSYTV QQNYTNMDIH VGQSFSFLVT MDQSGSNDYY IVASTRFTKS
301: SSSPKATGVA ILHYSSSQGP ASGPLPDPPI ELDTSFSMNQ ARSIRLLNVS AGAARPNPQG SFKYGQITVT DVYVIVNRPP EKIDGRLRAT LNGISYLPPS
401: TPLKLAQQYN ISGVYKLDFP KRPMNRHPKV DTSVMNGTYK GFMEIIFQNS DTTVKSYHLD GYAFFVVGMD FGLWTENSRS LYNKGDGVAR STTQVFPGAW
501: TAILVYLDNA GMWNLRIDNL ASWYLGQEVY LNVVNPEIDT SENSIPENTI YCGRLSPLQR DQSQRVNFSG SPRSVLVTSR GILLAIFAIL ISSLAR
Best Arabidopsis Sequence Match ( AT5G48450.2 )
(BLAST)
001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VSSLAR
Arabidopsis Description
sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.